RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 GTF2A1LQ9UNN4 478 aa12.75□□□□□ -0.37
CXCL1-202ENST00000509101 PRR32B1ATL7 298 aa12.74□□□□□ -0.37
CXCL1-202ENST00000509101 MPZP25189 248 aa12.74□□□□□ -0.37
CXCL1-202ENST00000509101 HTR1DP28221 377 aa12.74□□□□□ -0.37
CXCL1-202ENST00000509101 ERVK11-1P61568 191 aa12.74□□□□□ -0.37
CXCL1-202ENST00000509101 MS4A2Q01362 244 aa12.74□□□□□ -0.37
CXCL1-202ENST00000509101 C9orf152Q5JTZ5 239 aa12.74□□□□□ -0.37
CXCL1-202ENST00000509101 OR2T5Q6IEZ7 315 aa12.74□□□□□ -0.37
CXCL1-202ENST00000509101 KCTD18Q6PI47 426 aaPredicted RBP12.74□□□□□ -0.37
CXCL1-202ENST00000509101 CD300LDQ6UXZ3 194 aa12.74□□□□□ -0.37
CXCL1-202ENST00000509101 ANGPTL5Q86XS5 388 aa12.74□□□□□ -0.37
CXCL1-202ENST00000509101 CPOQ8IVL8 374 aa12.74□□□□□ -0.37
CXCL1-202ENST00000509101 TPRX1Q8N7U7 411 aa12.74□□□□□ -0.37
CXCL1-202ENST00000509101 OR4P4Q8NGL7 312 aa12.74□□□□□ -0.37
CXCL1-202ENST00000509101 OR2T29Q8NH02 315 aa12.74□□□□□ -0.37
CXCL1-202ENST00000509101 TRMT10AQ8TBZ6 339 aaKnown RBP12.74□□□□□ -0.37
CXCL1-202ENST00000509101 MROQ9BYG7 248 aa12.74□□□□□ -0.37
CXCL1-202ENST00000509101 TMEM133Q9H2Q1 129 aa12.74□□□□□ -0.37
CXCL1-202ENST00000509101 NUFIP1Q9UHK0 495 aaKnown RBP12.74□□□□□ -0.37
CXCL1-202ENST00000509101 U3KQK5 164 aa12.74□□□□□ -0.37
CXCL1-202ENST00000509101 KIAA2026Q5HYC2 2103 aa12.73□□□□□ -0.37
CXCL1-202ENST00000509101 TCRBV5S2A0A599 114 aa12.73□□□□□ -0.37
CXCL1-202ENST00000509101 hADV38S2A0JD32 116 aa12.73□□□□□ -0.37
CXCL1-202ENST00000509101 A6NIN4 97 aa12.73□□□□□ -0.37
CXCL1-202ENST00000509101 TTRP02766 147 aa12.73□□□□□ -0.37
CXCL1-202ENST00000509101 MRPL3P09001 348 aaKnown RBP12.73□□□□□ -0.37
CXCL1-202ENST00000509101 MEF2CQ06413 473 aaPredicted RBP12.73□□□□□ -0.37
CXCL1-202ENST00000509101 GINS1Q14691 196 aa12.73□□□□□ -0.37
CXCL1-202ENST00000509101 ZNF829Q3KNS6 432 aaPredicted RBP12.73□□□□□ -0.37
CXCL1-202ENST00000509101 SPATS1Q496A3 300 aa12.73□□□□□ -0.37
CXCL1-202ENST00000509101 SLC35D3Q5M8T2 416 aa12.73□□□□□ -0.37
CXCL1-202ENST00000509101 LCN1P1Q5VSP4 162 aa12.73□□□□□ -0.37
CXCL1-202ENST00000509101 TMEM42Q69YG0 159 aa12.73□□□□□ -0.37
CXCL1-202ENST00000509101 DEGS2Q6QHC5 323 aa12.73□□□□□ -0.37
CXCL1-202ENST00000509101 OR51D1Q8NGF3 324 aa12.73□□□□□ -0.37
CXCL1-202ENST00000509101 FEVQ99581 238 aa12.73□□□□□ -0.37
CXCL1-202ENST00000509101 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.73□□□□□ -0.37
CXCL1-202ENST00000509101 LINC00312Q9Y6C7 94 aa12.73□□□□□ -0.37
CXCL1-202ENST00000509101 TMEM82A0PJX8 343 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 F8VVB4 439 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 F8VWA3 439 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 DLGAP1O14490 977 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 MMP23AO75900 390 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 OR2F2O95006 317 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 INMTO95050 263 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 SLC2A5P22732 501 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 THBS3P49746 956 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 RIDAP52758 137 aaKnown RBP12.72□□□□□ -0.37
CXCL1-202ENST00000509101 CBX1P83916 185 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 IL24Q13007 206 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 APOFQ13790 326 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 BAIAP2L2Q6UXY1 529 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 STMN2Q93045 179 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 SLAMF9Q96A28 289 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 SNX22Q96L94 193 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 PKIBQ9C010 78 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 YIPF3Q9GZM5 350 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 CHST6Q9GZX3 395 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 MAGIXQ9H6Y5 334 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 ACTR3BQ9P1U1 418 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 IKZF2Q9UKS7 526 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 COPS3Q9UNS2 423 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 DNAH7Q8WXX0 4024 aa12.72□□□□□ -0.37
CXCL1-202ENST00000509101 FAM230AA0A1W2PPH8 454 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 PSMB11A5LHX3 300 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 IGHA1P01876 353 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 AMY1AP04745 511 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 AMY2AP04746 511 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 BRS3P32247 399 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 GRK1Q15835 563 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 ZBTB49Q6ZSB9 765 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 C18orf65Q6ZTR6 163 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 TRAPPC6BQ86SZ2 158 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 ZNF679Q8IYX0 411 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 ARHGAP24Q8N264 748 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 OSR2Q8N2R0 312 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 GIPC3Q8TF64 312 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 SLC7A6OSQ96CW6 309 aaPredicted RBP12.71□□□□□ -0.37
CXCL1-202ENST00000509101 CEP19Q96LK0 163 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 RBM14Q96PK6 669 aaKnown RBP12.71□□□□□ -0.37
CXCL1-202ENST00000509101 MCRIP2Q9BUT9 160 aaKnown RBP12.71□□□□□ -0.37
CXCL1-202ENST00000509101 CADM1Q9BY67 442 aaKnown RBP12.71□□□□□ -0.37
CXCL1-202ENST00000509101 DPM3Q9P2X0 92 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 IL36RNQ9UBH0 155 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 V9GYS6 101 aa12.71□□□□□ -0.37
CXCL1-202ENST00000509101 FAM172BPA6NC97 362 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 LOC110117498-PIK3R3F6TDL0 507 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 H0YHG0 523 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 ZNF254O75437 659 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 NHLRC4P0CG21 123 aaPredicted RBP12.7□□□□□ -0.38
CXCL1-202ENST00000509101 GABRR1P24046 479 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 LMO1P25800 156 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 ARHGDIBP52566 201 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 RPL23AP62750 156 aaKnown RBP12.7□□□□□ -0.38
CXCL1-202ENST00000509101 ROM1Q03395 351 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 TRIM25Q14258 630 aaKnown RBP12.7□□□□□ -0.38
CXCL1-202ENST00000509101 BCL2L15Q5TBC7 163 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 PRAMEF5Q5TYX0 476 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 PLEKHG7Q6ZR37 379 aa12.7□□□□□ -0.38
CXCL1-202ENST00000509101 C8orf86Q6ZUL3 223 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms