RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 ASF1AQ9Y294 204 aa4.28□□□□□ -1.72
LINC01088-205ENST00000509088 TDRD15B5MCY1 1934 aaKnown RBP4.28□□□□□ -1.72
LINC01088-205ENST00000509088 PARP14Q460N5 1801 aa4.28□□□□□ -1.72
LINC01088-205ENST00000509088 IGHV4OR15-8A0A075B7B6 117 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 BORCS7-ASMTA0A0B4J1R7 106 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 A0A1W2PPE2 198 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 DHRS7CA6NNS2 312 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 NPIPA7E9PJI5 369 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 CLDN34H7C241 214 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 SRPX2O60687 465 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-205ENST00000509088 FMO6PO60774 539 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 CTAG2O75638 210 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 DUS4LO95620 317 aaKnown RBP4.27□□□□□ -1.73
LINC01088-205ENST00000509088 AMBPP02760 352 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 FGF1P05230 155 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 ERCC1P07992 297 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-205ENST00000509088 SLC35G6P0C7Q6 338 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 NPIPA8P0DM63 369 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 LAMP1P11279 417 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 FGF5P12034 268 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 SERPINA2P20848 420 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 GLRA1P23415 457 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 MMP11P24347 488 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 IMPA1P29218 277 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 ARL2P36404 184 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 CEBPDP49716 269 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-205ENST00000509088 KHKP50053 298 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 NPY4RP50391 375 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 NOVA1P51513 510 aaKnown RBP4.27□□□□□ -1.73
LINC01088-205ENST00000509088 P2RX1P51575 399 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 FUT6P51993 359 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 STC1P52823 247 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 MAXP61244 160 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 RPS8P62241 208 aaKnown RBP4.27□□□□□ -1.73
LINC01088-205ENST00000509088 CSNK1G2P78368 415 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 SIGLEC14Q08ET2 396 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 RASGEF1BQ0VAM2 473 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 CHIT1Q13231 466 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 MADCAM1Q13477 382 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 ELOBQ15370 118 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 C2orf76Q3KRA6 126 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 ACSM3Q53FZ2 586 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 EIPR1Q53HC9 387 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 OCIAD2Q56VL3 154 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 OR2G6Q5TZ20 316 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 REEP3Q6NUK4 255 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 PRSS54Q6PEW0 395 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 CLEC18BQ6UXF7 455 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 UNQ6126/PRO20091Q6UXV3 157 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 ZNF705AQ6ZN79 300 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-205ENST00000509088 RPS27LQ71UM5 84 aaKnown RBP4.27□□□□□ -1.73
LINC01088-205ENST00000509088 TSEN54Q7Z6J9 526 aaKnown RBP4.27□□□□□ -1.73
LINC01088-205ENST00000509088 ZNF100Q8IYN0 542 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 KLHDC1Q8N7A1 406 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 COX18Q8N8Q8 333 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 SUMF2Q8NBJ7 301 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 NOXO1Q8NFA2 376 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 OR4K14Q8NGD5 310 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 OR9K2Q8NGE7 335 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 OR51D1Q8NGF3 324 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 OR4L1Q8NH43 312 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 OR5B3Q8NH48 314 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 SFXN5Q8TD22 340 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 GPX8Q8TED1 209 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 SPACA9Q96E40 222 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-205ENST00000509088 TVP23CQ96ET8 276 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 PPP1R16AQ96I34 528 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 DGAT2Q96PD7 388 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 TAAR6Q96RI8 345 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 ZNF607Q96SK3 696 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 NPY6RQ99463 290 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 RBKSQ9H477 322 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 RERGLQ9H628 205 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 SRD5A3Q9H8P0 318 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 BEX1Q9HBH7 125 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 SCRT2Q9NQ03 307 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 OSER1Q9NX31 292 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 SLC2A8Q9NY64 477 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 FKBP11Q9NYL4 201 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 BET1LQ9NYM9 111 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 MRPL27Q9P0M9 148 aaKnown RBP4.27□□□□□ -1.73
LINC01088-205ENST00000509088 MARCH4Q9P2E8 410 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-205ENST00000509088 B3GAT1Q9P2W7 334 aa4.27□□□□□ -1.73
LINC01088-205ENST00000509088 ZNF346Q9UL40 294 aaKnown RBP4.27□□□□□ -1.73
LINC01088-205ENST00000509088 SHROOM3Q8TF72 1996 aa4.26□□□□□ -1.73
LINC01088-205ENST00000509088 TRBC2A0A5B9 178 aa4.26□□□□□ -1.73
LINC01088-205ENST00000509088 TMEM235A6NFC5 223 aa4.26□□□□□ -1.73
LINC01088-205ENST00000509088 FTCDNL1E5RQL4 147 aa4.26□□□□□ -1.73
LINC01088-205ENST00000509088 TRAPPC2LH3BP13 241 aa4.26□□□□□ -1.73
LINC01088-205ENST00000509088 J3QRE1 110 aa4.26□□□□□ -1.73
LINC01088-205ENST00000509088 DCTN6O00399 190 aa4.26□□□□□ -1.73
LINC01088-205ENST00000509088 CXCL11O14625 94 aa4.26□□□□□ -1.73
LINC01088-205ENST00000509088 NDUFS4O43181 175 aa4.26□□□□□ -1.73
LINC01088-205ENST00000509088 ZNF354AO60765 605 aaPredicted RBP4.26□□□□□ -1.73
LINC01088-205ENST00000509088 NME6O75414 186 aaPredicted RBP4.26□□□□□ -1.73
LINC01088-205ENST00000509088 GLSO94925 669 aaPredicted RBP4.26□□□□□ -1.73
LINC01088-205ENST00000509088 PDYNP01213 254 aa4.26□□□□□ -1.73
LINC01088-205ENST00000509088 APOHP02749 345 aaPredicted RBP4.26□□□□□ -1.73
LINC01088-205ENST00000509088 HSPB1P04792 205 aaKnown RBP4.26□□□□□ -1.73
LINC01088-205ENST00000509088 CSN2P05814 226 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms