RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 IGFBP5P24593 272 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 S100A4P26447 101 aaKnown RBP3.41□□□□□ -1.86
NEDD4-209ENST00000508871 PCSK6P29122 969 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 CYB561P49447 251 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 LHX2P50458 406 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 CDKN2DP55273 166 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 FUT7Q11130 342 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 UNC119Q13432 240 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF770Q6IQ21 691 aaPredicted RBP3.41□□□□□ -1.86
NEDD4-209ENST00000508871 NIPAL1Q6NVV3 410 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 VN1R2Q8NFZ6 395 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 OR9G1Q8NH87 305 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 COPS9Q8WXC6 57 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 BORCS7Q96B45 105 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 OR4K3Q96R72 315 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 PDCD1LG2Q9BQ51 273 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 INIPQ9NRY2 104 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 FGF21Q9NSA1 209 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 DEC1Q9P2X7 70 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF729A6NN14 1252 aaPredicted RBP3.4□□□□□ -1.86
NEDD4-209ENST00000508871 HRKO00198 91 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 GPR31O00270 319 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 ERI3O43414 337 aaKnown RBP3.4□□□□□ -1.86
NEDD4-209ENST00000508871 DPM1O60762 260 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 GGCTO75223 188 aaKnown RBP3.4□□□□□ -1.86
NEDD4-209ENST00000508871 REM1O75628 298 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 KLK1P06870 262 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 INHBBP09529 407 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 RNF224P0DH78 156 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 NR4A1P22736 598 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 CCKARP32238 428 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 SGSHP51688 502 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 CGB2Q6NT52 195 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 PAQR6Q6TCH4 344 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 TMEM205Q6UW68 189 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 DRAM2Q6UX65 266 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 PTAR1Q7Z6K3 402 aaPredicted RBP3.4□□□□□ -1.86
NEDD4-209ENST00000508871 C8orf59Q8N0T1 100 aaPredicted RBP3.4□□□□□ -1.86
NEDD4-209ENST00000508871 BEST3Q8N1M1 668 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 TTC9BQ8N6N2 239 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 OR6F1Q8NGZ6 308 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 SLC25A28Q96A46 364 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 DNAJA3Q96EY1 480 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 SMIM8Q96KF7 97 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 TEAD3Q99594 435 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 ACOT13Q9NPJ3 140 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 HS3ST2Q9Y278 367 aa3.4□□□□□ -1.86
NEDD4-209ENST00000508871 OR4C46A6NHA9 309 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 RFPL4AA6NLU0 287 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 OR5K4A6NMS3 321 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 NDUFC2-KCTD14E9PQ53 114 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 RFPL4AL1F8VTS6 287 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 NBR2O15453 112 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 RAB38P57729 211 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 C1QTNF8P60827 252 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 COPZ1P61923 177 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 PGGHGQ32M88 737 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 SCGB2B2Q4G0G5 96 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 OTPQ5XKR4 325 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 GLYATQ6IB77 296 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 B3GNT8Q7Z7M8 397 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 REEP6Q96HR9 211 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 SMOXQ9NWM0 555 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 PTGDR2Q9Y5Y4 395 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 TRBV5-4A0A0C4DH59 114 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 SCO2A0A1W2PP80 73 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 DHRS7CA6NNS2 312 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 MFNGO00587 321 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 TIMM23O14925 209 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 FGF3P11487 239 aaPredicted RBP3.4□□□□□ -1.87
NEDD4-209ENST00000508871 SLC6A1P30531 599 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 KIR3DL2P43630 455 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 PGFP49763 221 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 SURF2Q15527 256 aaPredicted RBP3.4□□□□□ -1.87
NEDD4-209ENST00000508871 TECRLQ5HYJ1 363 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 LCN12Q6JVE5 192 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 Q6ZVQ6 151 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 ANKRD37Q7Z713 158 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 CCDC71LQ8N9Z2 235 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 DUS3LQ96G46 650 aaKnown RBP3.4□□□□□ -1.87
NEDD4-209ENST00000508871 SPACA5Q96QH8 159 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 ZBTB20Q9HC78 741 aaPredicted RBP3.4□□□□□ -1.87
NEDD4-209ENST00000508871 MARCOQ9UEW3 520 aaPredicted RBP3.4□□□□□ -1.87
NEDD4-209ENST00000508871 NOP16Q9Y3C1 178 aaKnown RBP3.4□□□□□ -1.87
NEDD4-209ENST00000508871 A0A1B0GWB2 263 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 J3KR12 359 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 SNAPINO95295 136 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 HIST1H1CP16403 213 aaKnown RBP3.4□□□□□ -1.87
NEDD4-209ENST00000508871 VDAC2P45880 294 aaPredicted RBP3.4□□□□□ -1.87
NEDD4-209ENST00000508871 GALR1P47211 349 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 THBS3P49746 956 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 VEGFCP49767 419 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 DLX1P56177 255 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 NCS1P62166 190 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 BAMBIQ13145 260 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 PDGFRLQ15198 375 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 PLK5Q496M5 336 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 FAM27D1Q5T7N8 215 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 LEG1Q6P5S2 330 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 GATD1Q8NB37 220 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms