RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 DUX4L3P0CJ86 424 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 DUX4L4P0CJ87 422 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 DUX4L5P0CJ88 424 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 DUX4L6P0CJ89 424 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 DUX4L7P0CJ90 424 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 PPIAL4FP0DN26 164 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 FCGR1AP12314 374 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 RPS2P15880 293 aaKnown RBP3.75□□□□□ -1.81
NUP54-206ENST00000508465 ATP6V1E1P36543 226 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 DDOSTP39656 456 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 PSMB10P40306 273 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 CD200P41217 278 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 CXCR4P61073 352 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 PRB3Q04118 309 aaPredicted RBP3.75□□□□□ -1.81
NUP54-206ENST00000508465 PRDX4Q13162 271 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 ZNF404Q494X3 552 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 TMEM155Q4W5P6 130 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 ESCO2Q56NI9 601 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 SLC35D3Q5M8T2 416 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 KCTD18Q6PI47 426 aaPredicted RBP3.75□□□□□ -1.81
NUP54-206ENST00000508465 DUX4L9Q6RFH8 374 aaPredicted RBP3.75□□□□□ -1.81
NUP54-206ENST00000508465 ZNF322Q6U7Q0 402 aaPredicted RBP3.75□□□□□ -1.81
NUP54-206ENST00000508465 KCTD8Q6ZWB6 473 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 MOB3CQ70IA8 216 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 COMMD2Q86X83 199 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 KLBQ86Z14 1044 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 PHC2Q8IXK0 858 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 SLC35F2Q8IXU6 374 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 RDH10Q8IZV5 341 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 BATF2Q8N1L9 274 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 SPICQ8N5J4 248 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 OR1M1Q8NGA1 313 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 OR10H4Q8NGA5 316 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 OR4M2Q8NGB6 313 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 OR52H1Q8NGJ2 320 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 OR51G2Q8NGK0 314 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 OR8S1Q8NH09 359 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 FAM81AQ8TBF8 368 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 LRRC29Q8WV35 223 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 DNAJC9Q8WXX5 260 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 TMEM158Q8WZ71 300 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 OR5P3Q8WZ94 311 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 EME1Q96AY2 570 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 RNF170Q96K19 258 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 TECTBQ96PL2 329 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 OR8B4Q96RC9 309 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 MBOAT4Q96T53 435 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 CNN2Q99439 309 aaKnown RBP3.75□□□□□ -1.81
NUP54-206ENST00000508465 CCL13Q99616 98 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 SLC6A7Q99884 636 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 RBM4BQ9BQ04 359 aaKnown RBP3.75□□□□□ -1.81
NUP54-206ENST00000508465 C19orf24Q9BVV8 132 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 PAPOLGQ9BWT3 736 aaKnown RBP3.75□□□□□ -1.81
NUP54-206ENST00000508465 FGF23Q9GZV9 251 aaPredicted RBP3.75□□□□□ -1.81
NUP54-206ENST00000508465 PBOV1Q9GZY1 135 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 GABARAPL1Q9H0R8 117 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 WDR13Q9H1Z4 485 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 SP140LQ9H930 580 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 ADGRL4Q9HBW9 690 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 S100A14Q9HCY8 104 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 GPR84Q9NQS5 396 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 SNTG1Q9NSN8 517 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 MRPL15Q9P015 296 aaKnown RBP3.75□□□□□ -1.81
NUP54-206ENST00000508465 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.75□□□□□ -1.81
NUP54-206ENST00000508465 DUX4Q9UBX2 424 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 MIOXQ9UGB7 285 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 MRM2Q9UI43 246 aaKnown RBP3.75□□□□□ -1.81
NUP54-206ENST00000508465 SLC22A13Q9Y226 551 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 PPIAL4AQ9Y536 164 aa3.75□□□□□ -1.81
NUP54-206ENST00000508465 WNK2Q9Y3S1 2297 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 A0A1B0GTI1 187 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 ZNF732B4DXR9 585 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 ZNF670-ZNF695F2Z2N8 137 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 LOC110117498-PIK3R3F6TDL0 507 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 LGALS8O00214 317 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 RRHO14718 337 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 TNFRSF13BO14836 293 aaPredicted RBP3.74□□□□□ -1.81
NUP54-206ENST00000508465 AKR7A2O43488 359 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 ADAM20O43506 726 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 FOXH1O75593 365 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 RHBDL1O75783 438 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 LHBP01229 141 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 APOC1P02654 83 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 TTRP02766 147 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 SELLP14151 372 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 HTR1FP30939 366 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 PITPNBP48739 271 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 GPM6AP51674 278 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 RIDAP52758 137 aaKnown RBP3.74□□□□□ -1.81
NUP54-206ENST00000508465 DLX1P56177 255 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 GNB2P62879 340 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 PAX2Q02962 417 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 PAX8Q06710 450 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 ZNF154Q13106 437 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 LRRC36Q1X8D7 754 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 TP53I3Q53FA7 332 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 KLF17Q5JT82 389 aaPredicted RBP3.74□□□□□ -1.81
NUP54-206ENST00000508465 BCL2L15Q5TBC7 163 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 LCN1P1Q5VSP4 162 aa3.74□□□□□ -1.81
NUP54-206ENST00000508465 NXNL2Q5VZ03 156 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms