RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 G3V2T6 193 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 SYT7O43581 403 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 ZNF737O75373 536 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 FBXO24O75426 580 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 INMTO95050 263 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 APOL3O95236 402 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 RBP4P02753 201 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 CHRM2P08172 466 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 ZNF728P0DKX0 622 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 DYNC1I2Q13409 638 aaKnown RBP9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 EDDM3AQ14507 147 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 UBE2V2Q15819 145 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 ATP6AP1Q15904 470 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 SSX2Q16385 188 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 NSUN5P1Q3KNT7 163 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 LDLRAD2Q5SZI1 272 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 SAMD5Q5TGI4 173 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 ZNF626Q68DY1 528 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 CCBE1Q6UXH8 406 aaPredicted RBP9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 GDPD3Q7L5L3 318 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 TCF23Q7RTU1 214 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 CATSPERDQ86XM0 798 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 TMEM219Q86XT9 240 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 OR8H2Q8N162 312 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 DTX3Q8N9I9 347 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 OR13D1Q8NGV5 346 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 RPS4Y2Q8TD47 263 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 ABCB10Q9NRK6 738 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 SERTAD4Q9NUC0 356 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 MTCH1Q9NZJ7 389 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 A0A1W2PQL4 384 aaPredicted RBP9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 TMEM82A0PJX8 343 aa9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 METTL15A6NJ78 407 aa9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 GATBO75879 557 aaKnown RBP9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 PRB2P02812 416 aaPredicted RBP9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 IGHV1-8P0DP01 117 aa9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 CD28P10747 220 aa9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 CNN3Q15417 329 aaKnown RBP9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 KPRPQ5T749 579 aaPredicted RBP9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 KDM4DQ6B0I6 523 aa9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 SLC25A26Q70HW3 274 aa9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 Q8N2B8 174 aa9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 OR11H6Q8NGC7 330 aa9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 MALSU1Q96EH3 234 aa9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 ZNF714Q96N38 554 aa9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 CHST5Q9GZS9 411 aa9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 GABARAPL1Q9H0R8 117 aa9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 IL36RNQ9UBH0 155 aa9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 WARS2Q9UGM6 360 aaKnown RBP9.31□□□□□ -0.92
HMGCS1-204ENST00000507293 LOC107986453A0A1B0GWG9 222 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 HAND1O96004 215 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 IGHA1P01876 353 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 OR2T7P0C7T2 308 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 JUNBP17275 347 aaPredicted RBP9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 HTR1FP30939 366 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 FUT6P51993 359 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 ACTA2P62736 377 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 ACTG2P63267 376 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 ACTC1P68032 377 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 ACTA1P68133 377 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 MEF2CQ06413 473 aaPredicted RBP9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 AMIGO2Q86SJ2 522 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 ZDHHC13Q8IUH4 622 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 EGFL6Q8IUX8 553 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 TPRX1Q8N7U7 411 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 OR10H4Q8NGA5 316 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 EMG1Q92979 244 aaKnown RBP9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 BORCS8Q96FH0 119 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 SNX22Q96L94 193 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 CIB1Q99828 191 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 ADI1Q9BV57 179 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 CDCA4Q9BXL8 241 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 PRSS22Q9GZN4 317 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 CHST6Q9GZX3 395 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 MMP28Q9H239 520 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 ENOPH1Q9UHY7 261 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 PITPNC1Q9UKF7 332 aa9.3□□□□□ -0.92
HMGCS1-204ENST00000507293 IGHV2-26A0A0B4J1V2 119 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 hADV38S2A0JD32 116 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 F2RL2O00254 374 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 SULT1C4O75897 302 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 GABRR1P24046 479 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 FASP25445 335 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 POLR2IP36954 125 aaKnown RBP9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 KIR3DL2P43630 455 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 POU3F4P49335 361 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 DYNLT3P51808 116 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 SNU13P55769 128 aaKnown RBP9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 OR12D2P58182 307 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 ZNF91Q05481 1191 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 GRK1Q15835 563 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 TP53I3Q53FA7 332 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 ARSJQ5FYB0 599 aaPredicted RBP9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 Q6ZS46 218 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 NDUFA11Q86Y39 141 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 PRSS35Q8N3Z0 413 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 ZNF676Q8N7Q3 588 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 CCDC54Q8NEL0 328 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 OR4S1Q8NGB4 309 aa9.29□□□□□ -0.92
HMGCS1-204ENST00000507293 OR52N4Q8NGI2 321 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms