RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 FGF12P61328 243 aa13.81□□□□□ -0.2
SNCA-209ENST00000506244 SLC35A2P78381 396 aa13.81□□□□□ -0.2
SNCA-209ENST00000506244 PDZK1IP1Q13113 114 aa13.81□□□□□ -0.2
SNCA-209ENST00000506244 DGUOKQ16854 277 aa13.81□□□□□ -0.2
SNCA-209ENST00000506244 SAXO1Q8IYX7 474 aa13.81□□□□□ -0.2
SNCA-209ENST00000506244 KIR3DL3Q8N743 410 aa13.81□□□□□ -0.2
SNCA-209ENST00000506244 C8orf46Q8TAG6 207 aa13.81□□□□□ -0.2
SNCA-209ENST00000506244 CNBD2Q96M20 576 aa13.81□□□□□ -0.2
SNCA-209ENST00000506244 DCTN5Q9BTE1 182 aa13.81□□□□□ -0.2
SNCA-209ENST00000506244 OR14J1Q9UGF5 321 aa13.81□□□□□ -0.2
SNCA-209ENST00000506244 GLS2Q9UI32 602 aa13.81□□□□□ -0.2
SNCA-209ENST00000506244 RRP15Q9Y3B9 282 aaKnown RBP13.81□□□□□ -0.2
SNCA-209ENST00000506244 KPTNQ9Y664 436 aa13.81□□□□□ -0.2
SNCA-209ENST00000506244 TRAV40A0A0B4J280 105 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 TOX4O94842 621 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 CD1AP06126 327 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 MAPK3P27361 379 aaPredicted RBP13.8□□□□□ -0.2
SNCA-209ENST00000506244 BPIFB3P59826 476 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 ACSM1Q08AH1 577 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 KISS1Q15726 138 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 Q499Y3 187 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 SPIN3Q5JUX0 258 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 GPR157Q5UAW9 335 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 USP43Q70EL4 1123 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 ZSCAN4Q8NAM6 433 aaPredicted RBP13.8□□□□□ -0.2
SNCA-209ENST00000506244 ZNRF1Q8ND25 227 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 RFT1Q96AA3 541 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 PGLYRP3Q96LB9 341 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 WDFY2Q96P53 400 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 JMJD8Q96S16 334 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 ZNF184Q99676 751 aaPredicted RBP13.8□□□□□ -0.2
SNCA-209ENST00000506244 FAM234AQ9H0X4 552 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 CNTD2Q9H8S5 307 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 TAS2R4Q9NYW5 299 aa13.8□□□□□ -0.2
SNCA-209ENST00000506244 SIRT4Q9Y6E7 314 aaPredicted RBP13.8□□□□□ -0.2
SNCA-209ENST00000506244 CUBNO60494 3623 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 TRBV5-5A0A0J9YX44 114 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 A0A1W2PPH5 198 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 A0A1W2PQ09 198 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 SPRY1O43609 319 aaPredicted RBP13.79□□□□□ -0.2
SNCA-209ENST00000506244 RGS10O43665 173 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 FCN3O75636 299 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 CHRM2P08172 466 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 CELP19835 753 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 BMXP51813 675 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 PDCD1Q15116 288 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 RBM48Q5RL73 367 aaKnown RBP13.79□□□□□ -0.2
SNCA-209ENST00000506244 ZNF529Q6P280 563 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 FAM58AQ8N1B3 248 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 BATF2Q8N1L9 274 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 CD177Q8N6Q3 437 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 ZFP41Q8N8Y5 198 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 LY6G5BQ8NDX9 201 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 TMEM158Q8WZ71 300 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 GPER1Q99527 375 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 PCGF1Q9BSM1 259 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 MS4A7Q9GZW8 240 aaPredicted RBP13.79□□□□□ -0.2
SNCA-209ENST00000506244 SEBOXQ9HB31 216 aaPredicted RBP13.79□□□□□ -0.2
SNCA-209ENST00000506244 TMEM138Q9NPI0 162 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 ONECUT1Q9UBC0 465 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 MAB21L2Q9Y586 359 aa13.79□□□□□ -0.2
SNCA-209ENST00000506244 PNMA8CA0A1B0GUJ8 204 aa13.78□□□□□ -0.2
SNCA-209ENST00000506244 KDM4BO94953 1096 aa13.78□□□□□ -0.2
SNCA-209ENST00000506244 TFF1P04155 84 aa13.78□□□□□ -0.2
SNCA-209ENST00000506244 MMP9P14780 707 aa13.78□□□□□ -0.2
SNCA-209ENST00000506244 PRKACAP17612 351 aa13.78□□□□□ -0.2
SNCA-209ENST00000506244 FSTP19883 344 aa13.78□□□□□ -0.2
SNCA-209ENST00000506244 BCL3P20749 454 aa13.78□□□□□ -0.2
SNCA-209ENST00000506244 CRHBPP24387 322 aa13.78□□□□□ -0.2
SNCA-209ENST00000506244 BLMHQ13867 455 aa13.78□□□□□ -0.2
SNCA-209ENST00000506244 SPHARQ15513 63 aa13.78□□□□□ -0.2
SNCA-209ENST00000506244 KLF17Q5JT82 389 aaPredicted RBP13.78□□□□□ -0.2
SNCA-209ENST00000506244 RBMS3Q6XE24 437 aaKnown RBP13.78□□□□□ -0.2
SNCA-209ENST00000506244 FGFRL1Q8N441 504 aa13.78□□□□□ -0.2
SNCA-209ENST00000506244 ASCC1Q8N9N2 400 aaKnown RBP13.78□□□□□ -0.2
SNCA-209ENST00000506244 OR5D18Q8NGL1 313 aa13.78□□□□□ -0.2
SNCA-209ENST00000506244 TBC1D15Q8TC07 691 aa13.78□□□□□ -0.2
SNCA-209ENST00000506244 SPACA5Q96QH8 159 aa13.78□□□□□ -0.2
SNCA-209ENST00000506244 SLC6A7Q99884 636 aa13.78□□□□□ -0.2
SNCA-209ENST00000506244 SIRPDQ9H106 197 aa13.78□□□□□ -0.2
SNCA-209ENST00000506244 DUSP21Q9H596 190 aa13.78□□□□□ -0.2
SNCA-209ENST00000506244 RBFOX1Q9NWB1 397 aaKnown RBP13.78□□□□□ -0.2
SNCA-209ENST00000506244 PAK1IP1Q9NWT1 392 aaPredicted RBP13.78□□□□□ -0.2
SNCA-209ENST00000506244 ATRQ13535 2644 aa13.77□□□□□ -0.2
SNCA-209ENST00000506244 M0R1W7 72 aa13.77□□□□□ -0.21
SNCA-209ENST00000506244 INMTO95050 263 aa13.77□□□□□ -0.21
SNCA-209ENST00000506244 HAND1O96004 215 aa13.77□□□□□ -0.21
SNCA-209ENST00000506244 ALDOBP05062 364 aa13.77□□□□□ -0.21
SNCA-209ENST00000506244 TMEM225BP0DP42 221 aa13.77□□□□□ -0.21
SNCA-209ENST00000506244 BDKRB2P30411 391 aa13.77□□□□□ -0.21
SNCA-209ENST00000506244 CEBPDP49716 269 aaPredicted RBP13.77□□□□□ -0.21
SNCA-209ENST00000506244 ARF6P62330 175 aa13.77□□□□□ -0.21
SNCA-209ENST00000506244 COL10A1Q03692 680 aa13.77□□□□□ -0.21
SNCA-209ENST00000506244 ZNF146Q15072 292 aa13.77□□□□□ -0.21
SNCA-209ENST00000506244 MED22Q15528 200 aa13.77□□□□□ -0.21
SNCA-209ENST00000506244 C9orf139Q6ZV77 190 aa13.77□□□□□ -0.21
SNCA-209ENST00000506244 PRSS48Q7RTY5 328 aa13.77□□□□□ -0.21
SNCA-209ENST00000506244 OR13C5Q8NGS8 318 aa13.77□□□□□ -0.21
SNCA-209ENST00000506244 CCDC90BQ9GZT6 254 aa13.77□□□□□ -0.21
SNCA-209ENST00000506244 MXRA5Q9NR99 2828 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms