RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 VGLL3A8MV65 326 aa8.78□□□□□ -1
TPM3-217ENST00000504663 GABARAPH6UMI1 98 aa8.78□□□□□ -1
TPM3-217ENST00000504663 CDIPTO14735 213 aa8.78□□□□□ -1
TPM3-217ENST00000504663 GEMIN2O14893 280 aaKnown RBP8.78□□□□□ -1
TPM3-217ENST00000504663 HTR3BO95264 441 aa8.78□□□□□ -1
TPM3-217ENST00000504663 CD55P08174 381 aa8.78□□□□□ -1
TPM3-217ENST00000504663 CD3GP09693 182 aa8.78□□□□□ -1
TPM3-217ENST00000504663 OCMP0CE72 109 aaPredicted RBP8.78□□□□□ -1
TPM3-217ENST00000504663 HIST1H1DP16402 221 aaKnown RBP8.78□□□□□ -1
TPM3-217ENST00000504663 EGR1P18146 543 aa8.78□□□□□ -1
TPM3-217ENST00000504663 CHATP28329 748 aa8.78□□□□□ -1
TPM3-217ENST00000504663 BTCP35070 178 aa8.78□□□□□ -1
TPM3-217ENST00000504663 TALDO1P37837 337 aa8.78□□□□□ -1
TPM3-217ENST00000504663 GATA4P43694 442 aa8.78□□□□□ -1
TPM3-217ENST00000504663 RFX2P48378 723 aa8.78□□□□□ -1
TPM3-217ENST00000504663 FGF12P61328 243 aa8.78□□□□□ -1
TPM3-217ENST00000504663 KLF9Q13886 244 aaPredicted RBP8.78□□□□□ -1
TPM3-217ENST00000504663 FBXL14Q8N1E6 418 aa8.78□□□□□ -1
TPM3-217ENST00000504663 OSR2Q8N2R0 312 aa8.78□□□□□ -1
TPM3-217ENST00000504663 POC1AQ8NBT0 407 aa8.78□□□□□ -1
TPM3-217ENST00000504663 OR8S1Q8NH09 359 aa8.78□□□□□ -1
TPM3-217ENST00000504663 SEH1LQ96EE3 360 aa8.78□□□□□ -1
TPM3-217ENST00000504663 ELMOD3Q96FG2 381 aa8.78□□□□□ -1
TPM3-217ENST00000504663 LRRC46Q96FV0 321 aa8.78□□□□□ -1
TPM3-217ENST00000504663 SELENOIQ9C0D9 397 aa8.78□□□□□ -1
TPM3-217ENST00000504663 PLK3Q9H4B4 646 aa8.78□□□□□ -1
TPM3-217ENST00000504663 ICE1Q9Y2F5 2266 aa8.78□□□□□ -1
TPM3-217ENST00000504663 ABCA4P78363 2273 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 FAM221AA4D161 298 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 TMEM235A6NFC5 223 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 ZNF780AO75290 641 aaPredicted RBP8.77□□□□□ -1.01
TPM3-217ENST00000504663 CHRM2P08172 466 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 SPNP16150 400 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 GNB3P16520 340 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 CPT2P23786 658 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 ASAH1Q13510 395 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 OXA1LQ15070 435 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 RSU1Q15404 277 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 TAF9Q16594 264 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 RNASE12Q5GAN4 147 aaKnown RBP8.77□□□□□ -1.01
TPM3-217ENST00000504663 C11orf71Q6IPW1 123 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 RAB12Q6IQ22 244 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 Q6P435 159 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 C16orf87Q6PH81 154 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 TGIF2LYQ8IUE0 185 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 MKXQ8IYA7 352 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 SPERTQ8NA61 448 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 OR2Z1Q8NG97 314 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 FAM222BQ8WU58 562 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 ITLN1Q8WWA0 313 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 MRPS24Q96EL2 167 aaKnown RBP8.77□□□□□ -1.01
TPM3-217ENST00000504663 PIK3IP1Q96FE7 263 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 ARHGAP5-AS1Q96IT6 56 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 HIST1H2AAQ96QV6 131 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 OR2V2Q96R30 315 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 THAP7Q9BT49 309 aaPredicted RBP8.77□□□□□ -1.01
TPM3-217ENST00000504663 PECRQ9BY49 303 aa8.77□□□□□ -1.01
TPM3-217ENST00000504663 C11orf54Q9H0W9 315 aaPredicted RBP8.77□□□□□ -1.01
TPM3-217ENST00000504663 ZMAT3Q9HA38 289 aaKnown RBP8.77□□□□□ -1.01
TPM3-217ENST00000504663 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.76□□□□□ -1.01
TPM3-217ENST00000504663 ISPDA4D126 451 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 FAM90A10PA6NDY2 464 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 FAM90A18PA6NE21 464 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 FAM90A16PA6NEW6 464 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 FAM90A20PA6NIJ5 464 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 FAM90A8PA6NJQ4 464 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 FAM90A7PA6NKC0 464 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 C17orf100A8MU93 164 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 FAM90A22PA8MWA6 464 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 FAM90A12PA8MX19 464 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 FAM90A5PA8MXJ8 464 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 FAM90A23PA8MXZ1 464 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 H7C417 338 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 WNT9BO14905 357 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 SPRY3O43610 288 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 ORC5O43913 435 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 SCGNO76038 276 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 LHBP01229 141 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 GSTP1P09211 210 aaKnown RBP8.76□□□□□ -1.01
TPM3-217ENST00000504663 FAM90A15PP0C7V4 464 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 FAM90A13PP0C7W8 464 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 FAM90A14PP0C7W9 464 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 FAM90A24PP0C7X0 464 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 GTF2F2P13984 249 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 APOBEC3AP31941 199 aaPredicted RBP8.76□□□□□ -1.01
TPM3-217ENST00000504663 SERPINF1P36955 418 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 CFHR2P36980 270 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 GDNFP39905 211 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 KIR2DL3P43628 341 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 SRP9P49458 86 aaKnown RBP8.76□□□□□ -1.01
TPM3-217ENST00000504663 ZNF81P51508 661 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 MRPS10P82664 201 aaKnown RBP8.76□□□□□ -1.01
TPM3-217ENST00000504663 PITPNAQ00169 270 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 GPR176Q14439 515 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 IL13RA2Q14627 380 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 PDCD1Q15116 288 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 CDNFQ49AH0 187 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 Q6ZTK2 550 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 C6orf201Q7Z4U5 140 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 OR8H2Q8N162 312 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms