RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 SLAMF9Q96A28 289 aa18.83■□□□□ 0.6
PTPN13-205ENST00000502971 SEC22CQ9BRL7 303 aa18.83■□□□□ 0.6
PTPN13-205ENST00000502971 RTL8AQ9BWD3 113 aa18.83■□□□□ 0.6
PTPN13-205ENST00000502971 PKIBQ9C010 78 aa18.83■□□□□ 0.6
PTPN13-205ENST00000502971 ASF1BQ9NVP2 202 aa18.83■□□□□ 0.6
PTPN13-205ENST00000502971 POU2F3Q9UKI9 436 aa18.83■□□□□ 0.6
PTPN13-205ENST00000502971 A8MXE2 369 aa18.82■□□□□ 0.6
PTPN13-205ENST00000502971 TRAPPC2LH3BP13 241 aa18.82■□□□□ 0.6
PTPN13-205ENST00000502971 VSIG10L2P0DP72 767 aa18.82■□□□□ 0.6
PTPN13-205ENST00000502971 AMY2BP19961 511 aa18.82■□□□□ 0.6
PTPN13-205ENST00000502971 BCL3P20749 454 aa18.82■□□□□ 0.6
PTPN13-205ENST00000502971 PMELP40967 661 aa18.82■□□□□ 0.6
PTPN13-205ENST00000502971 TAS2R46P59540 309 aa18.82■□□□□ 0.6
PTPN13-205ENST00000502971 RBPJQ06330 500 aa18.82■□□□□ 0.6
PTPN13-205ENST00000502971 IL24Q13007 206 aa18.82■□□□□ 0.6
PTPN13-205ENST00000502971 PSG7Q13046 419 aa18.82■□□□□ 0.6
PTPN13-205ENST00000502971 MICBQ29980 383 aa18.82■□□□□ 0.6
PTPN13-205ENST00000502971 OR10AD1Q8NGE0 317 aa18.82■□□□□ 0.6
PTPN13-205ENST00000502971 S100PBPQ96BU1 408 aa18.82■□□□□ 0.6
PTPN13-205ENST00000502971 CNTNAP3BQ96NU0 1288 aa18.82■□□□□ 0.6
PTPN13-205ENST00000502971 ST6GALNAC5Q9BVH7 336 aa18.82■□□□□ 0.6
PTPN13-205ENST00000502971 CNTNAP3Q9BZ76 1288 aa18.82■□□□□ 0.6
PTPN13-205ENST00000502971 MYOZ1Q9NP98 299 aaPredicted RBP18.82■□□□□ 0.6
PTPN13-205ENST00000502971 PKD1L2Q7Z442 2459 aa18.82■□□□□ 0.6
PTPN13-205ENST00000502971 IGHV2OR16-5A0A0B4J2B6 119 aa18.81■□□□□ 0.6
PTPN13-205ENST00000502971 TMEM82A0PJX8 343 aa18.81■□□□□ 0.6
PTPN13-205ENST00000502971 TPD52L2O43399 206 aaKnown RBP18.81■□□□□ 0.6
PTPN13-205ENST00000502971 PDCD6O75340 191 aa18.81■□□□□ 0.6
PTPN13-205ENST00000502971 SNU13P55769 128 aaKnown RBP18.81■□□□□ 0.6
PTPN13-205ENST00000502971 ARRDC1Q8N5I2 433 aa18.81■□□□□ 0.6
PTPN13-205ENST00000502971 ZDHHC22Q8N966 263 aa18.81■□□□□ 0.6
PTPN13-205ENST00000502971 OR5H2Q8NGV7 314 aa18.81■□□□□ 0.6
PTPN13-205ENST00000502971 CYYR1Q96J86 154 aa18.81■□□□□ 0.6
PTPN13-205ENST00000502971 FAAP24Q9BTP7 215 aa18.81■□□□□ 0.6
PTPN13-205ENST00000502971 TRAF4Q9BUZ4 470 aaPredicted RBP18.81■□□□□ 0.6
PTPN13-205ENST00000502971 OR51I2Q9H344 312 aa18.81■□□□□ 0.6
PTPN13-205ENST00000502971 MTCH1Q9NZJ7 389 aa18.81■□□□□ 0.6
PTPN13-205ENST00000502971 EDARQ9UNE0 448 aa18.81■□□□□ 0.6
PTPN13-205ENST00000502971 BSNQ9UPA5 3926 aa18.81■□□□□ 0.6
PTPN13-205ENST00000502971 MRPS15P82914 257 aaKnown RBP18.8■□□□□ 0.6
PTPN13-205ENST00000502971 HAGHLQ6PII5 290 aaPredicted RBP18.8■□□□□ 0.6
PTPN13-205ENST00000502971 MRGPRGQ86SM5 289 aa18.8■□□□□ 0.6
PTPN13-205ENST00000502971 NOXA1Q86UR1 476 aa18.8■□□□□ 0.6
PTPN13-205ENST00000502971 MUCL1Q96DR8 90 aa18.8■□□□□ 0.6
PTPN13-205ENST00000502971 PLK3Q9H4B4 646 aa18.8■□□□□ 0.6
PTPN13-205ENST00000502971 RHOFQ9HBH0 211 aa18.8■□□□□ 0.6
PTPN13-205ENST00000502971 AK3Q9UIJ7 227 aa18.8■□□□□ 0.6
PTPN13-205ENST00000502971 TLN1Q9Y490 2541 aaKnown RBP18.8■□□□□ 0.6
PTPN13-205ENST00000502971 A0A0G2JNJ9 132 aa18.8■□□□□ 0.6
PTPN13-205ENST00000502971 ANXA3P12429 323 aa18.8■□□□□ 0.6
PTPN13-205ENST00000502971 FUT3P21217 361 aa18.8■□□□□ 0.6
PTPN13-205ENST00000502971 DTYMKP23919 212 aa18.8■□□□□ 0.6
PTPN13-205ENST00000502971 NKX2-5P52952 324 aaPredicted RBP18.8■□□□□ 0.6
PTPN13-205ENST00000502971 FAM76BQ5HYJ3 339 aa18.8■□□□□ 0.6
PTPN13-205ENST00000502971 CMSS1Q9BQ75 279 aaKnown RBP18.8■□□□□ 0.6
PTPN13-205ENST00000502971 SULT4A1Q9BR01 284 aa18.8■□□□□ 0.6
PTPN13-205ENST00000502971 CHST6Q9GZX3 395 aa18.8■□□□□ 0.6
PTPN13-205ENST00000502971 ZNF69Q9UC07 566 aa18.8■□□□□ 0.6
PTPN13-205ENST00000502971 Q9UFV3 132 aa18.8■□□□□ 0.6
PTPN13-205ENST00000502971 TINAGQ9UJW2 476 aa18.8■□□□□ 0.6
PTPN13-205ENST00000502971 ZNF222Q9UK12 451 aa18.8■□□□□ 0.6
PTPN13-205ENST00000502971 MEIKINA0A087WXM9 373 aa18.79■□□□□ 0.6
PTPN13-205ENST00000502971 UBE2QL1A1L167 161 aa18.79■□□□□ 0.6
PTPN13-205ENST00000502971 LRP5LA4QPB2 252 aa18.79■□□□□ 0.6
PTPN13-205ENST00000502971 H3BUI4 141 aa18.79■□□□□ 0.6
PTPN13-205ENST00000502971 J3QT63 122 aa18.79■□□□□ 0.6
PTPN13-205ENST00000502971 C1QBP02746 253 aa18.79■□□□□ 0.6
PTPN13-205ENST00000502971 KITLGP21583 273 aa18.79■□□□□ 0.6
PTPN13-205ENST00000502971 BMP5P22003 454 aa18.79■□□□□ 0.6
PTPN13-205ENST00000502971 MPV17P39210 176 aa18.79■□□□□ 0.6
PTPN13-205ENST00000502971 NAAAQ02083 359 aa18.79■□□□□ 0.6
PTPN13-205ENST00000502971 ZNF718Q3SXZ3 478 aa18.79■□□□□ 0.6
PTPN13-205ENST00000502971 PRR30Q53SZ7 412 aaPredicted RBP18.79■□□□□ 0.6
PTPN13-205ENST00000502971 ATPAF1Q5TC12 328 aaPredicted RBP18.79■□□□□ 0.6
PTPN13-205ENST00000502971 LIX1LQ8IVB5 337 aa18.79■□□□□ 0.6
PTPN13-205ENST00000502971 ZNF230Q9UIE0 474 aaPredicted RBP18.79■□□□□ 0.6
PTPN13-205ENST00000502971 PURGQ9UJV8 347 aaKnown RBP18.79■□□□□ 0.6
PTPN13-205ENST00000502971 SYNGR1O43759 233 aa18.78■□□□□ 0.6
PTPN13-205ENST00000502971 CXCL3P19876 107 aa18.78■□□□□ 0.6
PTPN13-205ENST00000502971 CALCRP30988 508 aa18.78■□□□□ 0.6
PTPN13-205ENST00000502971 OR3A3P47888 321 aa18.78■□□□□ 0.6
PTPN13-205ENST00000502971 KCNJ8Q15842 424 aa18.78■□□□□ 0.6
PTPN13-205ENST00000502971 MPV17LQ2QL34 196 aa18.78■□□□□ 0.6
PTPN13-205ENST00000502971 MBNL2Q5VZF2 373 aaKnown RBP18.78■□□□□ 0.6
PTPN13-205ENST00000502971 SEZ6L2Q6UXD5 910 aa18.78■□□□□ 0.6
PTPN13-205ENST00000502971 LINC00596Q86U02 117 aa18.78■□□□□ 0.6
PTPN13-205ENST00000502971 TMEM17Q86X19 198 aa18.78■□□□□ 0.6
PTPN13-205ENST00000502971 OR8G5Q8NG78 346 aa18.78■□□□□ 0.6
PTPN13-205ENST00000502971 OR5AP2Q8NGF4 316 aa18.78■□□□□ 0.6
PTPN13-205ENST00000502971 RADILQ96JH8 1075 aa18.78■□□□□ 0.6
PTPN13-205ENST00000502971 USB1Q9BQ65 265 aaKnown RBP18.78■□□□□ 0.6
PTPN13-205ENST00000502971 ADAT1Q9BUB4 502 aaKnown RBP18.78■□□□□ 0.6
PTPN13-205ENST00000502971 TMEM100Q9NV29 134 aa18.78■□□□□ 0.6
PTPN13-205ENST00000502971 ZNF701Q9NV72 531 aaPredicted RBP18.78■□□□□ 0.6
PTPN13-205ENST00000502971 ELOVL5Q9NYP7 299 aa18.78■□□□□ 0.6
PTPN13-205ENST00000502971 ZNF581Q9P0T4 197 aa18.78■□□□□ 0.6
PTPN13-205ENST00000502971 PRRC2CQ9Y520 2896 aaKnown RBP18.78■□□□□ 0.6
PTPN13-205ENST00000502971 EEF1E1-BLOC1S5C9J1V9 151 aa18.77■□□□□ 0.6
PTPN13-205ENST00000502971 OR7C1O76099 320 aaPredicted RBP18.77■□□□□ 0.6
PTPN13-205ENST00000502971 ALKBH6Q3KRA9 238 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms