RNA–Protein interactions for RNA: ENST00000501704.3

TSC22D1-211, Transcript of TSC22 domain family member 1, humanhuman

TSL 2 BASIC

Gene TSC22D1, Length 4,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-211ENST00000501704 SMOC1Q9H4F8 434 aa13.17□□□□□ -0.3
TSC22D1-211ENST00000501704 PHF3Q92576 2039 aaKnown RBP13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 LAMA3Q16787 3333 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 SRSF10O75494 262 aaKnown RBP13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 CD81P60033 236 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 LCN15Q6UWW0 184 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 SPRED2Q7Z698 418 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 CAPNS2Q96L46 248 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 PRDM13Q9H4Q3 707 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 KIAA1456Q9P272 454 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 RFNGQ9Y644 331 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 WISP1O95388 367 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 GNRH1P01148 92 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 RABIFP47224 123 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 ZNF133P52736 654 aaPredicted RBP13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 ERVFRD-1P60508 538 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 IL15RAQ13261 267 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 LIAT1Q6ZQX7 453 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 GNPNAT1Q96EK6 184 aaPredicted RBP13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 MISP3Q96FF7 219 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 DKKL1Q9UK85 242 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 MS4A18H0YCH9 400 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 DFFBO76075 338 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 NOVA1P51513 510 aaKnown RBP13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 IGLV3-21P80748 117 aaPredicted RBP13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 ADIRFQ15847 76 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 MS4A18Q3C1V0 323 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 THEM4Q5T1C6 240 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 LRRC18Q8N456 261 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 KCNK17Q96T54 332 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 GPR87Q9BY21 358 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 METTL9Q9H1A3 318 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 CUTCQ9NTM9 273 aa13.16□□□□□ -0.3
TSC22D1-211ENST00000501704 MYO7BQ6PIF6 2116 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 A6NCN8 305 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 ATXN7O15265 892 aaPredicted RBP13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 EPHA1P21709 976 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 APOBEC1P41238 236 aaKnown RBP13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 ZNF574Q6ZN55 896 aaPredicted RBP13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 C16orf47Q6ZP98 133 aaPredicted RBP13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 ZNF286AQ9HBT8 521 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 FBLN5Q9UBX5 448 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 IGKV1D-8A0A087WSZ0 117 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 CEACAM18A8MTB9 384 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 RPS2P15880 293 aaKnown RBP13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 RAB4BP61018 213 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 DMRTC2Q8IXT2 367 aaPredicted RBP13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 LYPD6BQ8NI32 183 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 GPR173Q9NS66 373 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 PISDQ9UG56 409 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 HS3ST3B1Q9Y662 390 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 COL4A6Q14031 1691 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 SRP19P09132 144 aaKnown RBP13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 YPEL5P62699 121 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 RUNX1Q01196 453 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 ZNF880Q6PDB4 577 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 WWTR1Q9GZV5 400 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 PLEKHF2Q9H8W4 249 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 SLC2A9Q9NRM0 540 aa13.15□□□□□ -0.3
TSC22D1-211ENST00000501704 TGOLN2O43493 480 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 SCGB1D1O95968 90 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 IL2RGP31785 369 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 GLIPR1P48060 266 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 BLKP51451 505 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 SPCS3P61009 180 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 TMEM176BQ3YBM2 270 aaPredicted RBP13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 THNSL2Q86YJ6 484 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 OR5T1Q8NG75 326 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 PLA2G2FQ9BZM2 168 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 CEBPZOSA8MTT3 80 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 NR2C1P13056 603 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 OR11L1Q8NGX0 322 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 RHBDD1Q8TEB9 315 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 PITPNC1Q9UKF7 332 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 MCTS1Q9ULC4 181 aaKnown RBP13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 MMACHCQ9Y4U1 282 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 IGHV3-20A0A0C4DH32 117 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 IFITM10A6NMD0 228 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 DDAH2O95865 285 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 HLA-HP01893 362 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 FBLP22087 321 aaKnown RBP13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 RPS18P62269 152 aaKnown RBP13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 ZNF296Q8WUU4 475 aaPredicted RBP13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 RBMXL1Q96E39 390 aaKnown RBP13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 SHDQ96IW2 340 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 HSF4Q9ULV5 492 aa13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 LAMA2P24043 3122 aaKnown RBP13.14□□□□□ -0.31
TSC22D1-211ENST00000501704 SPRY1O43609 319 aaPredicted RBP13.13□□□□□ -0.31
TSC22D1-211ENST00000501704 COL9A1P20849 921 aa13.13□□□□□ -0.31
TSC22D1-211ENST00000501704 CSNK1A1P48729 337 aa13.13□□□□□ -0.31
TSC22D1-211ENST00000501704 TFF2Q03403 129 aa13.13□□□□□ -0.31
TSC22D1-211ENST00000501704 C21orf62-AS1Q17RA5 79 aa13.13□□□□□ -0.31
TSC22D1-211ENST00000501704 OR13D1Q8NGV5 346 aa13.13□□□□□ -0.31
TSC22D1-211ENST00000501704 OIT3Q8WWZ8 545 aa13.13□□□□□ -0.31
TSC22D1-211ENST00000501704 PLEK2Q9NYT0 353 aa13.13□□□□□ -0.31
TSC22D1-211ENST00000501704 LAMP3Q9UQV4 416 aa13.13□□□□□ -0.31
TSC22D1-211ENST00000501704 A0A1W2PNR3 127 aa13.13□□□□□ -0.31
TSC22D1-211ENST00000501704 LSM6P62312 80 aaKnown RBP13.13□□□□□ -0.31
TSC22D1-211ENST00000501704 BORCS8Q96FH0 119 aa13.13□□□□□ -0.31
TSC22D1-211ENST00000501704 ATG101Q9BSB4 218 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms