RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 RPLP1P05386 114 aaKnown RBP11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 DBHP09172 617 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 CST2P09228 141 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 CD33P20138 364 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 HOXA6P31267 233 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 WNT5AP41221 380 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 CLN3Q13286 438 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 TIPARPQ7Z3E1 657 aaKnown RBP11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 OR10A7Q8NGE5 316 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 OR2AJ1Q8NGZ0 328 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 CUTCQ9NTM9 273 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 KIAA1456Q9P272 454 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 TDRD6O60522 2096 aaKnown RBP11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 HSPA12AO43301 675 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 SSSCA1O60232 199 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 HPNP05981 417 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 SMIM10L1P0DMW3 83 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 IL11P20809 199 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 CTHP32929 405 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 OR3A1P47881 315 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 TFPI2P48307 235 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 MLF1P58340 268 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 OR5I1Q13606 314 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 CST6Q15828 149 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 CST9LP1Q5W188 147 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 BRICD5Q6PL45 260 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 LHFPL1Q86WI0 220 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 CARFQ8N187 725 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 ZNF283Q8N7M2 679 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 SMIM10Q96HG1 83 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 TIMM29Q9BSF4 260 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 SHANK1Q9Y566 2161 aa11.48□□□□□ -0.57
GAPVD1-220ENST00000497580 IGKV1D-43A0A0B4J1Z2 117 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 KAT7O95251 611 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 PPA1Q15181 289 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 GPR157Q5UAW9 335 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 LILRA6Q6PI73 481 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 YAF2Q8IY57 180 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 OR5C1Q8NGR4 320 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 OR11L1Q8NGX0 322 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 S1PR5Q9H228 398 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 PNO1Q9NRX1 252 aaKnown RBP11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 SRPK3Q9UPE1 567 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 FUT9Q9Y231 359 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 UTS2O95399 124 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 SFTPDP35247 375 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 SUCLG1P53597 346 aaKnown RBP11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 C1orf61Q13536 156 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 LGI3Q8N145 548 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 SLAMF6Q96DU3 332 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 C5orf34Q96MH7 638 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 CHST11Q9NPF2 352 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 PLEKHJ1Q9NW61 149 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 TUBD1Q9UJT1 453 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 NPIPA5E9PKD4 350 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 H3BP45 60 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 ELLP55199 621 aaPredicted RBP11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 FOXK1P85037 733 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 C1QL2Q7Z5L3 287 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 DIRC2Q96SL1 478 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 RTN4RQ9BZR6 473 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 PRTFDC1Q9NRG1 225 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 NPIPA1Q9UND3 350 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 MYO7BQ6PIF6 2116 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 CHD9Q3L8U1 2897 aa11.47□□□□□ -0.57
GAPVD1-220ENST00000497580 EFEMP2O95967 443 aa11.46□□□□□ -0.57
GAPVD1-220ENST00000497580 DRD3P35462 400 aa11.46□□□□□ -0.57
GAPVD1-220ENST00000497580 ZNF117Q03924 483 aa11.46□□□□□ -0.57
GAPVD1-220ENST00000497580 NOGQ13253 232 aa11.46□□□□□ -0.57
GAPVD1-220ENST00000497580 IQCJQ1A5X6 159 aa11.46□□□□□ -0.57
GAPVD1-220ENST00000497580 C20orf196Q8IYI0 205 aa11.46□□□□□ -0.57
GAPVD1-220ENST00000497580 ZNF321PQ8N8H1 164 aa11.46□□□□□ -0.57
GAPVD1-220ENST00000497580 DYRK2Q92630 601 aa11.46□□□□□ -0.57
GAPVD1-220ENST00000497580 GPR84Q9NQS5 396 aa11.46□□□□□ -0.57
GAPVD1-220ENST00000497580 MYOTQ9UBF9 498 aa11.46□□□□□ -0.57
GAPVD1-220ENST00000497580 ZNF266Q14584 549 aa11.46□□□□□ -0.57
GAPVD1-220ENST00000497580 FAM57BQ71RH2 274 aa11.46□□□□□ -0.57
GAPVD1-220ENST00000497580 OR2C3Q8N628 320 aa11.46□□□□□ -0.57
GAPVD1-220ENST00000497580 TMEM18Q96B42 140 aa11.46□□□□□ -0.57
GAPVD1-220ENST00000497580 ARV1Q9H2C2 271 aa11.46□□□□□ -0.57
GAPVD1-220ENST00000497580 ZNF665Q9H7R5 613 aa11.46□□□□□ -0.57
GAPVD1-220ENST00000497580 REV3LO60673 3130 aa11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 CEBPZOSA8MTT3 80 aa11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 PPP5D1E7EU14 171 aa11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 CA11O75493 328 aa11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 OPN1LWP04000 364 aa11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 ZNF728P0DKX0 622 aa11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 FGF5P12034 268 aa11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 POU3F1Q03052 451 aaPredicted RBP11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 COTL1Q14019 142 aa11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 PRSS8Q16651 343 aa11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 DNLZQ5SXM8 178 aa11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 RTL6Q6ICC9 239 aa11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 SLC35E3Q7Z769 313 aa11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 MRPL43Q8N983 215 aaKnown RBP11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 TM4SF19Q96DZ7 209 aa11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 ADGRG7Q96K78 797 aa11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 GPHA2Q96T91 129 aa11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 TXNIPQ9H3M7 391 aa11.46□□□□□ -0.58
GAPVD1-220ENST00000497580 KIR3DX1Q9H7L2 352 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms