RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 FAM90A9PA6NNJ1 464 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 FAM90A12PA8MX19 464 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 FAM90A5PA8MXJ8 464 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 OOSP1A8MZH6 123 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 CCL24O00175 119 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 DHRS3O75911 302 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 FAM90A15PP0C7V4 464 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 FAM90A13PP0C7W8 464 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 FAM90A14PP0C7W9 464 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 FAM90A24PP0C7X0 464 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 ALOX5APP20292 161 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 CD34P28906 385 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 ERP29P30040 261 aaKnown RBP10.61□□□□□ -0.71
COL1A1-209ENST00000495677 OR3A4PP47883 348 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 CLVS2Q5SYC1 327 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 ZNF695Q8IW36 515 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 ABHD12Q8N2K0 398 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 RNF148Q8N7C7 305 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 KLHL30-AS1Q8NEE0 82 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 RCHY1Q96PM5 261 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 PRR25Q96S07 402 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 DGCR6LQ9BY27 220 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 MED20Q9H944 212 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 SPAG4Q9NPE6 437 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 FGFR1OP2Q9NVK5 253 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 SCOCQ9UIL1 159 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 PIGLQ9Y2B2 252 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 UBE2J1Q9Y385 318 aaPredicted RBP10.61□□□□□ -0.71
COL1A1-209ENST00000495677 TMEM269A0A1B0GVZ9 245 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 SH2D7A6NKC9 451 aaPredicted RBP10.6□□□□□ -0.71
COL1A1-209ENST00000495677 LY6LH3BQJ8 138 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 TNFRSF11BO00300 401 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 E2F6O75461 281 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 MMP23AO75900 390 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 SASH3O75995 380 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 CEACAM3P40198 252 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 CD300LDQ6UXZ3 194 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 Q6ZSR3 168 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 KRT77Q7Z794 578 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 BCAS4Q8TDM0 211 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 RAX2Q96IS3 184 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 TEAD3Q99594 435 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 PBOV1Q9GZY1 135 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 GPR84Q9NQS5 396 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 ARMC1Q9NVT9 282 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 MAGEL2Q9UJ55 1249 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.6□□□□□ -0.71
COL1A1-209ENST00000495677 MOB4Q9Y3A3 225 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 SMAD5-AS1Q9Y6J3 95 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 HSPE1-MOB4S4R3N1 261 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 V9GYQ6 96 aa10.6□□□□□ -0.71
COL1A1-209ENST00000495677 TMEM82A0PJX8 343 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 MEX3AA1L020 520 aaKnown RBP10.59□□□□□ -0.71
COL1A1-209ENST00000495677 NUDT19A8MXV4 375 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 PRODHO43272 600 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 SELENOFO60613 162 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 CCDC22O60826 627 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 CCNB2O95067 398 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 HSD17B1P14061 328 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 PEX2P28328 305 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 ECI1P42126 302 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 SLC35B1P78383 322 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 KIR2DS1Q14954 304 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 SNAPC1Q16533 368 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 C9orf152Q5JTZ5 239 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 CCDC144NLQ6NUI1 221 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 HEPN1Q6WQI6 88 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 SBSPONQ8IVN8 264 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 OR5M8Q8NGP6 311 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 OR51E1Q8TCB6 317 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 CORO2AQ92828 525 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 KRTAP17-1Q9BYP8 105 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 OR51V1Q9H2C8 321 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 GAR1Q9NY12 217 aaKnown RBP10.59□□□□□ -0.71
COL1A1-209ENST00000495677 NUFIP1Q9UHK0 495 aaKnown RBP10.59□□□□□ -0.71
COL1A1-209ENST00000495677 ZNF256Q9Y2P7 627 aaPredicted RBP10.59□□□□□ -0.71
COL1A1-209ENST00000495677 V9GYS6 101 aa10.59□□□□□ -0.71
COL1A1-209ENST00000495677 ARRDC5A6NEK1 342 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 DHRS7CA6NNS2 312 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 BUB1B-PAK6H3BSN5 160 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 PSMD9O00233 223 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 FGF16O43320 207 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 ZNF254O75437 659 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 IGHG2P01859 326 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 SNRNP70P08621 437 aaKnown RBP10.58□□□□□ -0.72
COL1A1-209ENST00000495677 FAM106CPP0CH98 169 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 MNDAP41218 407 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 CDX1P47902 265 aaPredicted RBP10.58□□□□□ -0.72
COL1A1-209ENST00000495677 LUMP51884 338 aaPredicted RBP10.58□□□□□ -0.72
COL1A1-209ENST00000495677 HLA-DRB5Q30154 266 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 SLC35D3Q5M8T2 416 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 SLX4IPQ5VYV7 408 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 ANGPTL5Q86XS5 388 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 AQP11Q8NBQ7 271 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 OR52N4Q8NGI2 321 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 NSMCE2Q96MF7 247 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 CITED4Q96RK1 184 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 MROQ9BYG7 248 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 MYLK2Q9H1R3 596 aa10.58□□□□□ -0.72
COL1A1-209ENST00000495677 DCLRE1BQ9H816 532 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms