RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-240	ENST00000495293	KATNB1	Q9BVA0	655 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	C1QTNF5	Q9BXJ0	243 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	GON7	Q9BXV9	100 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	MMP28	Q9H239	520 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	OR51V1	Q9H2C8	321 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	DPAGT1	Q9H3H5	408 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	LIME1	Q9H400	295 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	C1orf198	Q9H425	327 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	FN3K	Q9H479	309 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	RANBP3	Q9H6Z4	567 aa	Predicted RBP	3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	MAN2C1	Q9NTJ4	1040 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	RBFOX1	Q9NWB1	397 aa	Known RBP	3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	BABAM2	Q9NXR7	383 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	COPZ2	Q9P299	210 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	EXTL2	Q9UBQ6	330 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	KLHL21	Q9UJP4	597 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	TBC1D24	Q9ULP9	559 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	N6AMT1	Q9Y5N5	214 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	CELSR2	Q9HCU4	2923 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	CRYBG3	Q68DQ2	2970 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	NBPF19	A0A087WUL8	3843 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	CENPE	Q02224	2701 aa		3.85	□□□□□ -1.79
RBM39-240	ENST00000495293	UNC79	Q9P2D8	2635 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	IGHV1-18	A0A0C4DH31	117 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293		A4D1N5	150 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	C12orf71	A8MTZ7	269 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	ZNF879	B4DU55	563 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	INMT-MINDY4	F8WBC2	141 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	GABRP	O00591	440 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	IMPA2	O14732	288 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	SPRY1	O43609	319 aa	Predicted RBP	3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	SSNA1	O43805	119 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	NOS1AP	O75052	506 aa	Predicted RBP	3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	TSC22D2	O75157	780 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	KHDRBS3	O75525	346 aa	Known RBP	3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	IGKV3-15	P01624	115 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	IGHM	P01871	453 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	HLA-H	P01893	362 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	LCAT	P04180	440 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	TACSTD2	P09758	323 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	CSF3	P09919	207 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	STOM	P27105	288 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	CRABP1	P29762	137 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	APLNR	P35414	380 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	OMP	P47874	163 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	RFX2	P48378	723 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	EVX1	P49640	407 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	IDH3G	P51553	393 aa	Predicted RBP	3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	ATP5J2	P56134	94 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	GNG2	P59768	71 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	RPS23	P62266	143 aa	Known RBP	3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	SNRPD2	P62316	118 aa	Known RBP	3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	BTG1	P62324	171 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	FABP5	Q01469	135 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	NAAA	Q02083	359 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	SLC3A1	Q07837	685 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	CD300C	Q08708	224 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	ACSM1	Q08AH1	577 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	RAB35	Q15286	201 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	TATDN3	Q17R31	274 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	TBC1D28	Q2M2D7	210 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	HSD17B12	Q53GQ0	312 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293		Q5PR19	223 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	PHYHD1	Q5SRE7	291 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	C10orf128	Q5T292	105 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	PYHIN1	Q6K0P9	492 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	ARL9	Q6T311	187 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	ZNF620	Q6ZNG0	422 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293		Q6ZSV7	163 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	ZNF767P	Q75MW2	155 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	LINGO2	Q7L985	606 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	SHF	Q7M4L6	423 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	FAM220A	Q7Z4H9	259 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	CEACAM19	Q7Z692	300 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	MDP1	Q86V88	176 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	LRRC28	Q86X40	367 aa	Predicted RBP	3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	MEX3D	Q86XN8	651 aa	Known RBP	3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	TCTE3	Q8IZS6	198 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	RDH10	Q8IZV5	341 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	SLC7A5P1	Q8MH63	180 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	MUC15	Q8N387	334 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	LRRC18	Q8N456	261 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	TOMM5	Q8N4H5	51 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	ARIH2OS	Q8N7S6	290 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	SAMD12	Q8N8I0	201 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	ZFP41	Q8N8Y5	198 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	PRR26	Q8N8Z3	221 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	OR6F1	Q8NGZ6	308 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	HAVCR2	Q8TDQ0	301 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	C17orf50	Q8WW18	174 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	HYLS1	Q96M11	299 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	ERMAP	Q96PL5	475 aa	Predicted RBP	3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	TSPAN32	Q96QS1	320 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	C7orf50	Q9BRJ6	194 aa	Known RBP	3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	MRPL13	Q9BYD1	178 aa	Known RBP	3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	BARHL1	Q9BZE3	327 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	OR52D1	Q9H346	318 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	NIPAL2	Q9H841	368 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	MARCH7	Q9H992	704 aa		3.84	□□□□□ -1.79
RBM39-240	ENST00000495293	CDH20	Q9HBT6	801 aa		3.84	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms