RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 KLF17Q5JT82 389 aaPredicted RBP13.18□□□□□ -0.3
LIME1-209ENST00000494776 Q8IYB0 196 aa13.18□□□□□ -0.3
LIME1-209ENST00000494776 CMTM4Q8IZR5 234 aa13.18□□□□□ -0.3
LIME1-209ENST00000494776 CD177Q8N6Q3 437 aa13.18□□□□□ -0.3
LIME1-209ENST00000494776 SPATA3Q8NHX4 192 aa13.18□□□□□ -0.3
LIME1-209ENST00000494776 RPS4Y2Q8TD47 263 aa13.18□□□□□ -0.3
LIME1-209ENST00000494776 GHSRQ92847 366 aa13.18□□□□□ -0.3
LIME1-209ENST00000494776 TMEM106AQ96A25 262 aa13.18□□□□□ -0.3
LIME1-209ENST00000494776 CPNE2Q96FN4 548 aaPredicted RBP13.18□□□□□ -0.3
LIME1-209ENST00000494776 SDSLQ96GA7 329 aa13.18□□□□□ -0.3
LIME1-209ENST00000494776 WDFY2Q96P53 400 aa13.18□□□□□ -0.3
LIME1-209ENST00000494776 MDFIQ99750 246 aa13.18□□□□□ -0.3
LIME1-209ENST00000494776 SLC6A7Q99884 636 aa13.18□□□□□ -0.3
LIME1-209ENST00000494776 DCTN5Q9BTE1 182 aa13.18□□□□□ -0.3
LIME1-209ENST00000494776 ANKRD60Q9BZ19 345 aa13.18□□□□□ -0.3
LIME1-209ENST00000494776 FKBP14Q9NWM8 211 aa13.18□□□□□ -0.3
LIME1-209ENST00000494776 ZNF222Q9UK12 451 aa13.18□□□□□ -0.3
LIME1-209ENST00000494776 TPRKBQ9Y3C4 175 aa13.18□□□□□ -0.3
LIME1-209ENST00000494776 MAB21L2Q9Y586 359 aa13.18□□□□□ -0.3
LIME1-209ENST00000494776 A0A0A6YYJ9 748 aa13.17□□□□□ -0.3
LIME1-209ENST00000494776 A0A1W2PQ09 198 aa13.17□□□□□ -0.3
LIME1-209ENST00000494776 IGHV4-38-2P0DP08 117 aa13.17□□□□□ -0.3
LIME1-209ENST00000494776 VHLP40337 213 aa13.17□□□□□ -0.3
LIME1-209ENST00000494776 GPR157Q5UAW9 335 aa13.17□□□□□ -0.3
LIME1-209ENST00000494776 DMKNQ6E0U4 476 aaPredicted RBP13.17□□□□□ -0.3
LIME1-209ENST00000494776 RBMS3Q6XE24 437 aaKnown RBP13.17□□□□□ -0.3
LIME1-209ENST00000494776 SATL1Q86VE3 508 aa13.17□□□□□ -0.3
LIME1-209ENST00000494776 NANOGP1Q8N7R0 232 aa13.17□□□□□ -0.3
LIME1-209ENST00000494776 OR5D18Q8NGL1 313 aa13.17□□□□□ -0.3
LIME1-209ENST00000494776 RGP1Q92546 391 aaPredicted RBP13.17□□□□□ -0.3
LIME1-209ENST00000494776 CNBD2Q96M20 576 aa13.17□□□□□ -0.3
LIME1-209ENST00000494776 GPER1Q99527 375 aa13.17□□□□□ -0.3
LIME1-209ENST00000494776 MND1Q9BWT6 205 aa13.17□□□□□ -0.3
LIME1-209ENST00000494776 ELL3Q9HB65 397 aaPredicted RBP13.17□□□□□ -0.3
LIME1-209ENST00000494776 ZNF69Q9UC07 566 aa13.17□□□□□ -0.3
LIME1-209ENST00000494776 GLS2Q9UI32 602 aa13.17□□□□□ -0.3
LIME1-209ENST00000494776 COL6A5A8TX70 2615 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 F8VVB4 439 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 F8VWA3 439 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 ANGPTL7O43827 346 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 ALX3O95076 343 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 SFTPBP07988 381 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 CHRM2P08172 466 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 TMEM225BP0DP42 221 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 PRKACAP17612 351 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 CELP19835 753 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 BCL3P20749 454 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 NPBWR2P48146 333 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 PPP3R1P63098 170 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 KISS1Q15726 138 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 YIF1BQ5BJH7 314 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 FAM185AQ8N0U4 392 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 FAM58AQ8N1B3 248 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 ASCC1Q8N9N2 400 aaKnown RBP13.16□□□□□ -0.3
LIME1-209ENST00000494776 ZNF485Q8NCK3 441 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 LY6G5BQ8NDX9 201 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 JMJD8Q96S16 334 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 RBFOX1Q9NWB1 397 aaKnown RBP13.16□□□□□ -0.3
LIME1-209ENST00000494776 TAS2R4Q9NYW5 299 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 KPTNQ9Y664 436 aa13.16□□□□□ -0.3
LIME1-209ENST00000494776 CALCBP10092 127 aa13.15□□□□□ -0.3
LIME1-209ENST00000494776 SNU13P55769 128 aaKnown RBP13.15□□□□□ -0.3
LIME1-209ENST00000494776 COL10A1Q03692 680 aa13.15□□□□□ -0.3
LIME1-209ENST00000494776 BLMHQ13867 455 aa13.15□□□□□ -0.3
LIME1-209ENST00000494776 PDCD1Q15116 288 aa13.15□□□□□ -0.3
LIME1-209ENST00000494776 USP43Q70EL4 1123 aa13.15□□□□□ -0.3
LIME1-209ENST00000494776 OR13C5Q8NGS8 318 aa13.15□□□□□ -0.3
LIME1-209ENST00000494776 LHX4Q969G2 390 aa13.15□□□□□ -0.3
LIME1-209ENST00000494776 DMRTB1Q96MA1 342 aa13.15□□□□□ -0.3
LIME1-209ENST00000494776 CCDC90BQ9GZT6 254 aa13.15□□□□□ -0.3
LIME1-209ENST00000494776 SIRPDQ9H106 197 aa13.15□□□□□ -0.3
LIME1-209ENST00000494776 CKLFQ9UBR5 152 aa13.15□□□□□ -0.3
LIME1-209ENST00000494776 RAB26Q9ULW5 256 aa13.15□□□□□ -0.3
LIME1-209ENST00000494776 PCDHGB5Q9Y5G0 923 aa13.15□□□□□ -0.3
LIME1-209ENST00000494776 CUBNO60494 3623 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 TRBV23-1A0A0A0MS06 115 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 TK1P04183 234 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 MMP9P14780 707 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 MED22Q15528 200 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 Q499Y3 187 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 RNLSQ5VYX0 342 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 BRD3OSQ6XYD6 125 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 RNF144BQ7Z419 303 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 VMO1Q7Z5L0 202 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 SAXO1Q8IYX7 474 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 BCL6BQ8N143 479 aaPredicted RBP13.14□□□□□ -0.31
LIME1-209ENST00000494776 KIR3DL3Q8N743 410 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 OR51A2Q8NGJ7 313 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 C8orf46Q8TAG6 207 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 PGLYRP3Q96LB9 341 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 TBX15Q96SF7 602 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 CDCA4Q9BXL8 241 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 FAM192AQ9GZU8 254 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 FAM234AQ9H0X4 552 aa13.14□□□□□ -0.31
LIME1-209ENST00000494776 RRP15Q9Y3B9 282 aaKnown RBP13.14□□□□□ -0.31
LIME1-209ENST00000494776 TRBV5-5A0A0J9YX44 114 aa13.13□□□□□ -0.31
LIME1-209ENST00000494776 A0A1W2PPH5 198 aa13.13□□□□□ -0.31
LIME1-209ENST00000494776 RGS10O43665 173 aa13.13□□□□□ -0.31
LIME1-209ENST00000494776 KDM4BO94953 1096 aa13.13□□□□□ -0.31
LIME1-209ENST00000494776 VENTXO95231 258 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms