RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 ZNF488Q96MN9 340 aa17.51■□□□□ 0.39
KPNA1-210ENST00000494339 PKIBQ9C010 78 aa17.51■□□□□ 0.39
KPNA1-210ENST00000494339 MYO18BQ8IUG5 2567 aa17.5■□□□□ 0.39
KPNA1-210ENST00000494339 WIPF3A6NGB9 483 aa17.5■□□□□ 0.39
KPNA1-210ENST00000494339 TMEM210A6NLX4 147 aa17.5■□□□□ 0.39
KPNA1-210ENST00000494339 TRAPPC2LH3BP13 241 aa17.5■□□□□ 0.39
KPNA1-210ENST00000494339 SPRY3O43610 288 aa17.5■□□□□ 0.39
KPNA1-210ENST00000494339 LPLP06858 475 aa17.5■□□□□ 0.39
KPNA1-210ENST00000494339 MPZP25189 248 aa17.5■□□□□ 0.39
KPNA1-210ENST00000494339 IL24Q13007 206 aa17.5■□□□□ 0.39
KPNA1-210ENST00000494339 PIGYQ3MUY2 71 aa17.5■□□□□ 0.39
KPNA1-210ENST00000494339 PRAMEF6Q5VXH4 476 aa17.5■□□□□ 0.39
KPNA1-210ENST00000494339 TMEM200AQ86VY9 491 aa17.5■□□□□ 0.39
KPNA1-210ENST00000494339 FBXL14Q8N1E6 418 aa17.5■□□□□ 0.39
KPNA1-210ENST00000494339 OSR2Q8N2R0 312 aa17.5■□□□□ 0.39
KPNA1-210ENST00000494339 SPERTQ8NA61 448 aa17.5■□□□□ 0.39
KPNA1-210ENST00000494339 GPX8Q8TED1 209 aa17.5■□□□□ 0.39
KPNA1-210ENST00000494339 ELMOD3Q96FG2 381 aa17.5■□□□□ 0.39
KPNA1-210ENST00000494339 Q96M66 194 aa17.5■□□□□ 0.39
KPNA1-210ENST00000494339 ELF5Q9UKW6 265 aaPredicted RBP17.5■□□□□ 0.39
KPNA1-210ENST00000494339 C3orf80F5H4A9 247 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 CSF1P09603 554 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 GABRR1P24046 479 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 BTCP35070 178 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 ACTBP60709 375 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 ACTG1P63261 375 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 PLA1AQ53H76 456 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 OR56B1Q8NGI3 324 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 CREB3L1Q96BA8 519 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 MARVELD1Q9BSK0 173 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 TM2D1Q9BX74 207 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 DPAGT1Q9H3H5 408 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 PCDHB16Q9NRJ7 776 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 A6NLC8 198 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 VSTM5A8MXK1 200 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 GNB3P16520 340 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 CPT2P23786 658 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 SERPINF1P36955 418 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 ZNF81P51508 661 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 SNU13P55769 128 aaKnown RBP17.49■□□□□ 0.39
KPNA1-210ENST00000494339 MPPED2Q15777 294 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 TAF9Q16594 264 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 FAM89BQ8N5H3 189 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 CYYR1Q96J86 154 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 UFSP2Q9NUQ7 469 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 ST3GAL6Q9Y274 331 aa17.49■□□□□ 0.39
KPNA1-210ENST00000494339 CACNA1DQ01668 2161 aa17.48■□□□□ 0.39
KPNA1-210ENST00000494339 TMEM235A6NFC5 223 aa17.48■□□□□ 0.39
KPNA1-210ENST00000494339 MELTFP08582 738 aa17.48■□□□□ 0.39
KPNA1-210ENST00000494339 LOXP28300 417 aaPredicted RBP17.48■□□□□ 0.39
KPNA1-210ENST00000494339 GUCA2AQ02747 115 aa17.48■□□□□ 0.39
KPNA1-210ENST00000494339 ZNF260Q3ZCT1 412 aa17.48■□□□□ 0.39
KPNA1-210ENST00000494339 PLAC9Q5JTB6 97 aa17.48■□□□□ 0.39
KPNA1-210ENST00000494339 RSBN1Q5VWQ0 802 aaPredicted RBP17.48■□□□□ 0.39
KPNA1-210ENST00000494339 ZNF826PQ6ZT77 177 aa17.48■□□□□ 0.39
KPNA1-210ENST00000494339 RAB3CQ96E17 227 aa17.48■□□□□ 0.39
KPNA1-210ENST00000494339 SEH1LQ96EE3 360 aa17.48■□□□□ 0.39
KPNA1-210ENST00000494339 HRASLSQ9HDD0 168 aa17.48■□□□□ 0.39
KPNA1-210ENST00000494339 ZNF581Q9P0T4 197 aa17.48■□□□□ 0.39
KPNA1-210ENST00000494339 GEMIN2O14893 280 aaKnown RBP17.47■□□□□ 0.39
KPNA1-210ENST00000494339 RNF224P0DH78 156 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 BLVRBP30043 206 aaPredicted RBP17.47■□□□□ 0.39
KPNA1-210ENST00000494339 FAUP35544 74 aaKnown RBP17.47■□□□□ 0.39
KPNA1-210ENST00000494339 TMEM50BP56557 158 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 CDNFQ49AH0 187 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 OLFML2AQ68BL7 652 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 Q6ZTK2 550 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 ZNF554Q86TJ5 538 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 CHAC2Q8WUX2 184 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 MRPS24Q96EL2 167 aaKnown RBP17.47■□□□□ 0.39
KPNA1-210ENST00000494339 ARHGAP5-AS1Q96IT6 56 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 CACNG6Q9BXT2 260 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 CISD1Q9NZ45 108 aaKnown RBP17.47■□□□□ 0.39
KPNA1-210ENST00000494339 ZNF107Q9UII5 783 aaPredicted RBP17.47■□□□□ 0.39
KPNA1-210ENST00000494339 POLDIP2Q9Y2S7 368 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 RBM11P57052 281 aaKnown RBP17.47■□□□□ 0.39
KPNA1-210ENST00000494339 GMFBP60983 142 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 MZT1Q08AG7 82 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 PDCD1Q15116 288 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 PCGF3Q3KNV8 242 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 SPRNQ5BIV9 151 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 AGAP6Q5VW22 663 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 ELP2Q6IA86 826 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 C11orf53Q8IXP5 236 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 LILRB1Q8NHL6 650 aaPredicted RBP17.47■□□□□ 0.39
KPNA1-210ENST00000494339 OR2V2Q96R30 315 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 NEURL2Q9BR09 285 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 IL36RNQ9UBH0 155 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 NUBP2Q9Y5Y2 271 aa17.47■□□□□ 0.39
KPNA1-210ENST00000494339 MEIS3P1A6NDR6 274 aa17.46■□□□□ 0.39
KPNA1-210ENST00000494339 IGHV1-46P01743 117 aa17.46■□□□□ 0.39
KPNA1-210ENST00000494339 MT-ND4P03905 459 aa17.46■□□□□ 0.39
KPNA1-210ENST00000494339 GSTP1P09211 210 aaKnown RBP17.46■□□□□ 0.39
KPNA1-210ENST00000494339 CD200P41217 278 aa17.46■□□□□ 0.39
KPNA1-210ENST00000494339 FGF12P61328 243 aa17.46■□□□□ 0.39
KPNA1-210ENST00000494339 Q8NFD4 153 aa17.46■□□□□ 0.39
KPNA1-210ENST00000494339 UPRTQ96BW1 309 aa17.46■□□□□ 0.39
KPNA1-210ENST00000494339 USP9XQ93008 2570 aaPredicted RBP17.45■□□□□ 0.38
KPNA1-210ENST00000494339 AKR7A2O43488 359 aa17.45■□□□□ 0.38
KPNA1-210ENST00000494339 PRKACAP17612 351 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms