RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 C1orf229Q6ZS94 237 aaPredicted RBP11.24□□□□□ -0.61
COL1A1-208ENST00000494334 MS4A15Q8N5U1 240 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 CD177Q8N6Q3 437 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 RAB40AQ8WXH6 277 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 SDSLQ96GA7 329 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 MED30Q96HR3 178 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 DERL3Q96Q80 235 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 MGLLQ99685 303 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 TMED9Q9BVK6 235 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 C7orf69Q9H7B7 122 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 TMEM138Q9NPI0 162 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 ACOT13Q9NPJ3 140 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 LPAR3Q9UBY5 353 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 LRRC42Q9Y546 428 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 TRAV8-7A0A075B6U6 113 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 IGHV2-70DA0A0C4DH43 119 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 KIR2DS1A0A191URI9 304 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 NKX6-3A6NJ46 265 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 J3QLI3 93 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 KDM4BO94953 1096 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 KNG1P01042 644 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 CPEP16870 476 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 FSTP19883 344 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 BDKRB2P30411 391 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 PRDX2P32119 198 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 CEBPDP49716 269 aaPredicted RBP11.23□□□□□ -0.61
COL1A1-208ENST00000494334 PPP3R1P63098 170 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 IL13RA1P78552 427 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 PAX8Q06710 450 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 CD276Q5ZPR3 534 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 BTN2A1Q7KYR7 527 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 ZNF367Q7RTV3 350 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 SATL1Q86VE3 508 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 SPARTQ8N0X7 666 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 ZNRF1Q8ND25 227 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 ST8SIA4Q92187 359 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 EMG1Q92979 244 aaKnown RBP11.23□□□□□ -0.61
COL1A1-208ENST00000494334 NUDT16L1Q9BRJ7 211 aaKnown RBP11.23□□□□□ -0.61
COL1A1-208ENST00000494334 NOX4Q9NPH5 578 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 RBFOX1Q9NWB1 397 aaKnown RBP11.23□□□□□ -0.61
COL1A1-208ENST00000494334 OR14J1Q9UGF5 321 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 OPN4Q9UHM6 478 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 METRNQ9UJH8 293 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 FOXJ3Q9UPW0 622 aa11.23□□□□□ -0.61
COL1A1-208ENST00000494334 MAGEA13PA6NCF6 341 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 GABRPO00591 440 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 SC5DO75845 299 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 SFTPBP07988 381 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 TMEM225BP0DP42 221 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 CALCBP10092 127 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 HNF1AP20823 631 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 MAPK3P27361 379 aaPredicted RBP11.22□□□□□ -0.61
COL1A1-208ENST00000494334 GP2P55259 537 aaKnown RBP11.22□□□□□ -0.61
COL1A1-208ENST00000494334 C11orf91Q3C1V1 193 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 LRRC10Q5BKY1 277 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 DDI2Q5TDH0 399 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 BTNL3Q6UXE8 466 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 C1QL2Q7Z5L3 287 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 PHC2Q8IXK0 858 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 Q8IYB0 196 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 SAXO1Q8IYX7 474 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 FAM58AQ8N1B3 248 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 SVOPQ8N4V2 548 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 ZSCAN4Q8NAM6 433 aaPredicted RBP11.22□□□□□ -0.61
COL1A1-208ENST00000494334 THRSPQ92748 146 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 TMEM203Q969S6 136 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 CPNE2Q96FN4 548 aaPredicted RBP11.22□□□□□ -0.61
COL1A1-208ENST00000494334 GPER1Q99527 375 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 NKX3-1Q99801 234 aaPredicted RBP11.22□□□□□ -0.61
COL1A1-208ENST00000494334 IL36RNQ9UBH0 155 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 CKLFQ9UBR5 152 aa11.22□□□□□ -0.61
COL1A1-208ENST00000494334 SLC25A10Q9UBX3 287 aaPredicted RBP11.22□□□□□ -0.61
COL1A1-208ENST00000494334 SF3B6Q9Y3B4 125 aaKnown RBP11.22□□□□□ -0.61
COL1A1-208ENST00000494334 GPR37O15354 613 aa11.21□□□□□ -0.61
COL1A1-208ENST00000494334 ECDO95905 644 aaPredicted RBP11.21□□□□□ -0.61
COL1A1-208ENST00000494334 MAS1P04201 325 aa11.21□□□□□ -0.61
COL1A1-208ENST00000494334 ZNF93P35789 620 aaPredicted RBP11.21□□□□□ -0.61
COL1A1-208ENST00000494334 RPS25P62851 125 aaKnown RBP11.21□□□□□ -0.61
COL1A1-208ENST00000494334 ARMCX4Q5H9R4 360 aa11.21□□□□□ -0.61
COL1A1-208ENST00000494334 FAM27D1Q5T7N8 215 aa11.21□□□□□ -0.61
COL1A1-208ENST00000494334 TMEM91Q6ZNR0 172 aa11.21□□□□□ -0.61
COL1A1-208ENST00000494334 CEACAM19Q7Z692 300 aa11.21□□□□□ -0.61
COL1A1-208ENST00000494334 ZNF561Q8N587 486 aa11.21□□□□□ -0.61
COL1A1-208ENST00000494334 TMEM185AQ8NFB2 350 aa11.21□□□□□ -0.61
COL1A1-208ENST00000494334 PXT1Q8NFP0 134 aa11.21□□□□□ -0.61
COL1A1-208ENST00000494334 TNFAIP8L1Q8WVP5 186 aa11.21□□□□□ -0.61
COL1A1-208ENST00000494334 RHOFQ9HBH0 211 aa11.21□□□□□ -0.61
COL1A1-208ENST00000494334 HMG20AQ9NP66 347 aa11.21□□□□□ -0.61
COL1A1-208ENST00000494334 AUP1Q9Y679 476 aa11.21□□□□□ -0.61
COL1A1-208ENST00000494334 NSD1Q96L73 2696 aaPredicted RBP11.21□□□□□ -0.62
COL1A1-208ENST00000494334 ENSAO43768 121 aaKnown RBP11.2□□□□□ -0.62
COL1A1-208ENST00000494334 LIPFP07098 398 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 CHRM2P08172 466 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 FAM157CP0CG43 387 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 NDUFB7P17568 137 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 PRKACAP17612 351 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 SRD5A1P18405 259 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 ADRA2CP18825 462 aa11.2□□□□□ -0.62
COL1A1-208ENST00000494334 SRP14P37108 136 aaKnown RBP11.2□□□□□ -0.62
COL1A1-208ENST00000494334 PTGFRP43088 359 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms