RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 NRG4Q8WWG1 115 aa18.02■□□□□ 0.48
HPS3-207ENST00000494327 DMRTB1Q96MA1 342 aa18.02■□□□□ 0.48
HPS3-207ENST00000494327 C1orf147Q96MC9 270 aaPredicted RBP18.02■□□□□ 0.48
HPS3-207ENST00000494327 OPALINQ96PE5 141 aa18.02■□□□□ 0.48
HPS3-207ENST00000494327 SPACA5Q96QH8 159 aa18.02■□□□□ 0.48
HPS3-207ENST00000494327 JAM3Q9BX67 310 aa18.02■□□□□ 0.48
HPS3-207ENST00000494327 VCXQ9H320 206 aa18.02■□□□□ 0.48
HPS3-207ENST00000494327 DHDHQ9UQ10 334 aa18.02■□□□□ 0.48
HPS3-207ENST00000494327 CAB39Q9Y376 341 aaPredicted RBP18.02■□□□□ 0.48
HPS3-207ENST00000494327 H0YAE9 185 aa18.01■□□□□ 0.47
HPS3-207ENST00000494327 SPRY1O43609 319 aaPredicted RBP18.01■□□□□ 0.47
HPS3-207ENST00000494327 CALCBP10092 127 aa18.01■□□□□ 0.47
HPS3-207ENST00000494327 MYL12AP19105 171 aa18.01■□□□□ 0.47
HPS3-207ENST00000494327 SLC9A3R2Q15599 337 aa18.01■□□□□ 0.47
HPS3-207ENST00000494327 Q8N7P7 452 aa18.01■□□□□ 0.47
HPS3-207ENST00000494327 OR4M1Q8NGD0 313 aa18.01■□□□□ 0.47
HPS3-207ENST00000494327 GGHQ92820 318 aa18.01■□□□□ 0.47
HPS3-207ENST00000494327 EMG1Q92979 244 aaKnown RBP18.01■□□□□ 0.47
HPS3-207ENST00000494327 SPSB1Q96BD6 273 aa18.01■□□□□ 0.47
HPS3-207ENST00000494327 TMEM80Q96HE8 168 aa18.01■□□□□ 0.47
HPS3-207ENST00000494327 ZCCHC4Q9H5U6 513 aa18.01■□□□□ 0.47
HPS3-207ENST00000494327 TNFRSF19Q9NS68 423 aa18.01■□□□□ 0.47
HPS3-207ENST00000494327 C19orf12Q9NSK7 152 aa18.01■□□□□ 0.47
HPS3-207ENST00000494327 CHCHD3Q9NX63 227 aaKnown RBP18.01■□□□□ 0.47
HPS3-207ENST00000494327 DIMT1Q9UNQ2 313 aaKnown RBP18.01■□□□□ 0.47
HPS3-207ENST00000494327 EXOSC1Q9Y3B2 195 aaKnown RBP18.01■□□□□ 0.47
HPS3-207ENST00000494327 HSPE1-MOB4S4R3N1 261 aa18.01■□□□□ 0.47
HPS3-207ENST00000494327 A0A1W2PRD5 423 aa18■□□□□ 0.47
HPS3-207ENST00000494327 A0A1W2PRF3 423 aa18■□□□□ 0.47
HPS3-207ENST00000494327 A0A1W2PRM7 423 aa18■□□□□ 0.47
HPS3-207ENST00000494327 HOXA3O43365 443 aaPredicted RBP18■□□□□ 0.47
HPS3-207ENST00000494327 NPBWR2P48146 333 aa18■□□□□ 0.47
HPS3-207ENST00000494327 COL10A1Q03692 680 aa18■□□□□ 0.47
HPS3-207ENST00000494327 BLMHQ13867 455 aa18■□□□□ 0.47
HPS3-207ENST00000494327 XAF1Q6GPH4 301 aa18■□□□□ 0.47
HPS3-207ENST00000494327 ASCC1Q8N9N2 400 aaKnown RBP18■□□□□ 0.47
HPS3-207ENST00000494327 HAVCR2Q8TDQ0 301 aa18■□□□□ 0.47
HPS3-207ENST00000494327 SLC25A28Q96A46 364 aa18■□□□□ 0.47
HPS3-207ENST00000494327 RBFOX1Q9NWB1 397 aaKnown RBP18■□□□□ 0.47
HPS3-207ENST00000494327 CLEC2DQ9UHP7 191 aa18■□□□□ 0.47
HPS3-207ENST00000494327 TRBV23-1A0A0A0MS06 115 aa17.99■□□□□ 0.47
HPS3-207ENST00000494327 ANGPTL7O43827 346 aa17.99■□□□□ 0.47
HPS3-207ENST00000494327 TK1P04183 234 aa17.99■□□□□ 0.47
HPS3-207ENST00000494327 RPSAP08865 295 aaKnown RBP17.99■□□□□ 0.47
HPS3-207ENST00000494327 BCL3P20749 454 aa17.99■□□□□ 0.47
HPS3-207ENST00000494327 VHLP40337 213 aa17.99■□□□□ 0.47
HPS3-207ENST00000494327 SOX2P48431 317 aa17.99■□□□□ 0.47
HPS3-207ENST00000494327 SNU13P55769 128 aaKnown RBP17.99■□□□□ 0.47
HPS3-207ENST00000494327 RPL31P62899 125 aaKnown RBP17.99■□□□□ 0.47
HPS3-207ENST00000494327 KLRD1Q13241 179 aa17.99■□□□□ 0.47
HPS3-207ENST00000494327 MED21Q13503 144 aa17.99■□□□□ 0.47
HPS3-207ENST00000494327 RPL22L1Q6P5R6 122 aaKnown RBP17.99■□□□□ 0.47
HPS3-207ENST00000494327 RNF144BQ7Z419 303 aa17.99■□□□□ 0.47
HPS3-207ENST00000494327 SERPINA12Q8IW75 414 aa17.99■□□□□ 0.47
HPS3-207ENST00000494327 OR5D18Q8NGL1 313 aa17.99■□□□□ 0.47
HPS3-207ENST00000494327 OR5D14Q8NGL3 314 aa17.99■□□□□ 0.47
HPS3-207ENST00000494327 NEK6Q9HC98 313 aa17.99■□□□□ 0.47
HPS3-207ENST00000494327 BABAM2Q9NXR7 383 aa17.99■□□□□ 0.47
HPS3-207ENST00000494327 TMEM89A2RUT3 159 aa17.98■□□□□ 0.47
HPS3-207ENST00000494327 XPNPEP2O43895 674 aa17.98■□□□□ 0.47
HPS3-207ENST00000494327 CHRM2P08172 466 aa17.98■□□□□ 0.47
HPS3-207ENST00000494327 HCKP08631 526 aa17.98■□□□□ 0.47
HPS3-207ENST00000494327 DUSP1P28562 367 aa17.98■□□□□ 0.47
HPS3-207ENST00000494327 ST3GAL4Q11206 333 aa17.98■□□□□ 0.47
HPS3-207ENST00000494327 PDZK1IP1Q13113 114 aa17.98■□□□□ 0.47
HPS3-207ENST00000494327 CCDC58Q4VC31 144 aa17.98■□□□□ 0.47
HPS3-207ENST00000494327 Q8IYB0 196 aa17.98■□□□□ 0.47
HPS3-207ENST00000494327 ZMAT3Q9HA38 289 aaKnown RBP17.98■□□□□ 0.47
HPS3-207ENST00000494327 IL36RNQ9UBH0 155 aa17.98■□□□□ 0.47
HPS3-207ENST00000494327 A0A0U1RQK1 487 aa17.97■□□□□ 0.47
HPS3-207ENST00000494327 RNASEK-C17orf49H0YIS7 233 aa17.97■□□□□ 0.47
HPS3-207ENST00000494327 M0R1W7 72 aa17.97■□□□□ 0.47
HPS3-207ENST00000494327 MT-ND2P03891 347 aa17.97■□□□□ 0.47
HPS3-207ENST00000494327 PIPP12273 146 aaPredicted RBP17.97■□□□□ 0.47
HPS3-207ENST00000494327 PRKACAP17612 351 aa17.97■□□□□ 0.47
HPS3-207ENST00000494327 EEF1B2P24534 225 aaKnown RBP17.97■□□□□ 0.47
HPS3-207ENST00000494327 CDK5R1Q15078 307 aa17.97■□□□□ 0.47
HPS3-207ENST00000494327 TMEM200BQ69YZ2 307 aa17.97■□□□□ 0.47
HPS3-207ENST00000494327 LAIR2Q6ISS4 152 aa17.97■□□□□ 0.47
HPS3-207ENST00000494327 FIP1L1Q6UN15 594 aaKnown RBP17.97■□□□□ 0.47
HPS3-207ENST00000494327 Q6YL49 198 aa17.97■□□□□ 0.47
HPS3-207ENST00000494327 C1orf122Q6ZSJ8 110 aa17.97■□□□□ 0.47
HPS3-207ENST00000494327 FAM58AQ8N1B3 248 aa17.97■□□□□ 0.47
HPS3-207ENST00000494327 PIP4P2Q8N4L2 257 aa17.97■□□□□ 0.47
HPS3-207ENST00000494327 PARP16Q8N5Y8 322 aa17.97■□□□□ 0.47
HPS3-207ENST00000494327 BPIFB6Q8NFQ5 453 aa17.97■□□□□ 0.47
HPS3-207ENST00000494327 METTL8Q9H825 291 aaKnown RBP17.97■□□□□ 0.47
HPS3-207ENST00000494327 NOX4Q9NPH5 578 aa17.97■□□□□ 0.47
HPS3-207ENST00000494327 SIRT4Q9Y6E7 314 aaPredicted RBP17.97■□□□□ 0.47
HPS3-207ENST00000494327 EFCAB10A6NFE3 127 aa17.96■□□□□ 0.47
HPS3-207ENST00000494327 K7N7A8 449 aa17.96■□□□□ 0.47
HPS3-207ENST00000494327 SULT1B1O43704 296 aa17.96■□□□□ 0.47
HPS3-207ENST00000494327 HAND1O96004 215 aa17.96■□□□□ 0.47
HPS3-207ENST00000494327 RNASE1P07998 156 aaKnown RBP17.96■□□□□ 0.47
HPS3-207ENST00000494327 GUCA2AQ02747 115 aa17.96■□□□□ 0.47
HPS3-207ENST00000494327 METAP1DQ6UB28 335 aaPredicted RBP17.96■□□□□ 0.47
HPS3-207ENST00000494327 PNKDQ8N490 385 aa17.96■□□□□ 0.47
HPS3-207ENST00000494327 GPR148Q8TDV2 347 aa17.96■□□□□ 0.47
HPS3-207ENST00000494327 RGP1Q92546 391 aaPredicted RBP17.96■□□□□ 0.47
HPS3-207ENST00000494327 TFAP2CQ92754 450 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms