RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 FAM90A18PA6NE21 464 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 FAM90A16PA6NEW6 464 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 FAM90A20PA6NIJ5 464 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 FAM90A8PA6NJQ4 464 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 FAM90A7PA6NKC0 464 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 FAM90A22PA8MWA6 464 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 FAM90A12PA8MX19 464 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 FAM90A5PA8MXJ8 464 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 FAM90A23PA8MXZ1 464 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 C3orf80F5H4A9 247 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 SH2D1BO14796 132 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 LY6HO94772 140 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 FAM90A15PP0C7V4 464 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 FAM90A13PP0C7W8 464 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 FAM90A14PP0C7W9 464 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 FAM90A24PP0C7X0 464 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 CD37P11049 281 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 BCL3P20749 454 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 ART1P52961 327 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 OR10A3P58181 314 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 GMFBP60983 142 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 MPV17LQ2QL34 196 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 CHST4Q8NCG5 386 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 OR4D6Q8NGJ1 314 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 C10orf105Q8TEF2 133 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 PTX4Q96A99 478 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 MED30Q96HR3 178 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 RNF167Q9H6Y7 350 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 HES4Q9HCC6 221 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 HMG20AQ9NP66 347 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 MTCH1Q9NZJ7 389 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 CCDC59Q9P031 241 aaKnown RBP12.54□□□□□ -0.4
ACTB-213ENST00000493945 MIOXQ9UGB7 285 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 ADAM30Q9UKF2 790 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 ASH1LQ9NR48 2969 aaKnown RBP12.53□□□□□ -0.4
ACTB-213ENST00000493945 OR2AT4A6NND4 320 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 IGHV2-70P01814 119 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 MGMTP16455 207 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 ZNF182P17025 639 aaPredicted RBP12.53□□□□□ -0.4
ACTB-213ENST00000493945 RAB6AP20340 208 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 CD80P33681 288 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 RPS19P39019 145 aaKnown RBP12.53□□□□□ -0.4
ACTB-213ENST00000493945 PMELP40967 661 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 ERVK11-1P61568 191 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 ARL6IP1Q15041 203 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 P2RY14Q15391 338 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 ZNF404Q494X3 552 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 SPRNQ5BIV9 151 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 NHLRC3Q5JS37 347 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 OR8B3Q8NGG8 313 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 NDNFQ8TB73 568 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 OR8B2Q96RD0 313 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 BPESC1Q9GZL8 116 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 RBM38Q9H0Z9 239 aaKnown RBP12.53□□□□□ -0.4
ACTB-213ENST00000493945 ZNF665Q9H7R5 613 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 SEBOXQ9HB31 216 aaPredicted RBP12.53□□□□□ -0.4
ACTB-213ENST00000493945 RBFOX1Q9NWB1 397 aaKnown RBP12.53□□□□□ -0.4
ACTB-213ENST00000493945 FBLN5Q9UBX5 448 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 RAB22AQ9UL26 194 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 CACNG2Q9Y698 323 aa12.53□□□□□ -0.4
ACTB-213ENST00000493945 SHISA3A0PJX4 238 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 DPPA5A6NC42 116 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 LYNX1G3V0Z9 82 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 MPIG6BO95866 241 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 CHRM2P08172 466 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 LYNX1P0DP58 116 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 ZNF44P15621 663 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 RPS2P15880 293 aaKnown RBP12.52□□□□□ -0.41
ACTB-213ENST00000493945 NR4A2P43354 598 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 GABRA2P47869 451 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 NPY4RP50391 375 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 RBM11P57052 281 aaKnown RBP12.52□□□□□ -0.41
ACTB-213ENST00000493945 IL13RA1P78552 427 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 ZNF146Q15072 292 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 FAM166AQ6J272 317 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 LRRC28Q86X40 367 aaPredicted RBP12.52□□□□□ -0.41
ACTB-213ENST00000493945 LYPD6Q86Y78 171 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 ZNF561Q8N587 486 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 OR51D1Q8NGF3 324 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 OR51T1Q8NGJ9 327 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 OR14J1Q9UGF5 321 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 ST3GAL6Q9Y274 331 aa12.52□□□□□ -0.41
ACTB-213ENST00000493945 IGKV1-12A0A0C4DH73 117 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 FUOMA2VDF0 154 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 SMIM30A4D0T7 59 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 HAND1O96004 215 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 IGKV1D-12P01611 117 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 SFTPBP07988 381 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 EGR1P18146 543 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 IKZF1Q13422 519 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 ZMYND11Q15326 602 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 LRRC10Q5BKY1 277 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 AVPI1Q5T686 147 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 SFRP4Q6FHJ7 346 aaPredicted RBP12.51□□□□□ -0.41
ACTB-213ENST00000493945 RAB12Q6IQ22 244 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 DEFB108BQ8NET1 73 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 Q8NFD4 153 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 OR56B1Q8NGI3 324 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 OR10K1Q8NGX5 313 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 FAM46BQ96A09 425 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms