RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 HORMAD2Q8N7B1 307 aa10.17□□□□□ -0.78
BRCA1-222ENST00000493919 OR2Z1Q8NG97 314 aa10.17□□□□□ -0.78
BRCA1-222ENST00000493919 OR9I1Q8NGQ6 314 aa10.17□□□□□ -0.78
BRCA1-222ENST00000493919 OR10X1Q8NGY0 326 aa10.17□□□□□ -0.78
BRCA1-222ENST00000493919 TMEM125Q96AQ2 219 aa10.17□□□□□ -0.78
BRCA1-222ENST00000493919 C16orf58Q96GQ5 468 aa10.17□□□□□ -0.78
BRCA1-222ENST00000493919 ARHGDIGQ99819 225 aa10.17□□□□□ -0.78
BRCA1-222ENST00000493919 PBDC1Q9BVG4 233 aa10.17□□□□□ -0.78
BRCA1-222ENST00000493919 NXF5Q9H1B4 397 aaKnown RBP10.17□□□□□ -0.78
BRCA1-222ENST00000493919 ONECUT1Q9UBC0 465 aa10.17□□□□□ -0.78
BRCA1-222ENST00000493919 ZNF462Q96JM2 2506 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 A0A0D9SG52 128 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 ZNF670-ZNF695F2Z2N8 137 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 RNASEK-C17orf49H0YIS7 233 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 UPK1AO00322 258 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 ARPC2O15144 300 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 MAGEB4O15481 346 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-222ENST00000493919 RAB36O95755 333 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 S100A3P33764 101 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 AQP2P41181 271 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 RPL23AP62750 156 aaKnown RBP10.16□□□□□ -0.78
BRCA1-222ENST00000493919 PMS2P11Q13670 270 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 RBM39Q14498 530 aaKnown RBP10.16□□□□□ -0.78
BRCA1-222ENST00000493919 ZNF766Q5HY98 468 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 ALG10BQ5I7T1 473 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 FHL5Q5TD97 284 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 ZNF57Q68EA5 555 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-222ENST00000493919 OR2L13Q8N349 312 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 C1orf162Q8NEQ5 155 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-222ENST00000493919 OR51G2Q8NGK0 314 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 OR1J2Q8NGS2 313 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 OR5P2Q8WZ92 322 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 POP5Q969H6 163 aaKnown RBP10.16□□□□□ -0.78
BRCA1-222ENST00000493919 RPS10P5Q9NQ39 176 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 G6PC2Q9NQR9 355 aa10.16□□□□□ -0.78
BRCA1-222ENST00000493919 IGHV2OR16-5A0A0B4J2B6 119 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 OR2M5A3KFT3 312 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 TVP23AA6NH52 213 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 PPP5D1E7EU14 171 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 MFNGO00587 321 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 PDE6DO43924 150 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 NEURL1O76050 574 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 CPSF4O95639 269 aaKnown RBP10.15□□□□□ -0.78
BRCA1-222ENST00000493919 PIGAP37287 484 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 NAAAQ02083 359 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 PLCXD2Q0VAA5 305 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 PCK2Q16822 640 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 SNAI3Q3KNW1 292 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 PRR30Q53SZ7 412 aaPredicted RBP10.15□□□□□ -0.78
BRCA1-222ENST00000493919 TMEM268Q5VZI3 342 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 ZNF585AQ6P3V2 769 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 OPN5Q6U736 354 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 Q8NA96 180 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 ZSCAN4Q8NAM6 433 aaPredicted RBP10.15□□□□□ -0.78
BRCA1-222ENST00000493919 NUP43Q8NFH3 380 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 OR1S2Q8NGQ3 325 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 OR56B4Q8NH76 319 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 CNIH3Q8TBE1 160 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 SLC7A13Q8TCU3 470 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 SMAP2Q8WU79 429 aaPredicted RBP10.15□□□□□ -0.78
BRCA1-222ENST00000493919 GGHQ92820 318 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 SLC25A46Q96AG3 418 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 MRAP2Q96G30 205 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 SYT3Q9BQG1 590 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 SDR39U1Q9NRG7 319 aaPredicted RBP10.15□□□□□ -0.78
BRCA1-222ENST00000493919 LYRM2Q9NU23 88 aaPredicted RBP10.15□□□□□ -0.78
BRCA1-222ENST00000493919 TMEM38BQ9NVV0 291 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 OR10H1Q9Y4A9 318 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 RELNP78509 3460 aa10.15□□□□□ -0.78
BRCA1-222ENST00000493919 ANKRD61A6NGH8 418 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 G3V4G9 280 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 RNASET2O00584 256 aaKnown RBP10.15□□□□□ -0.79
BRCA1-222ENST00000493919 SCGNO76038 276 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 TOXO94900 526 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 LCATP04180 440 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 FAHP16930 419 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 KITLGP21583 273 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 CCKARP32238 428 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 GAS1P54826 345 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 TAS2R41P59536 307 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 PRR5P85299 388 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 MEF2DQ14814 521 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 UBE2V2Q15819 145 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 MDGA2Q7Z553 956 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 CMTM1Q8IZ96 169 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 BATF2Q8N1L9 274 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 ZNF441Q8N8Z8 693 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 TMEM178AQ8NBL3 297 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 MDS2Q8NDY4 140 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 RNF125Q96EQ8 232 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 VSTM2LQ96N03 204 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 LAT2Q9GZY6 243 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 TRIM36Q9NQ86 728 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 ZNF391Q9UJN7 358 aa10.15□□□□□ -0.79
BRCA1-222ENST00000493919 ELOVL7A1L3X0 281 aa10.14□□□□□ -0.79
BRCA1-222ENST00000493919 FRG2CA6NGY1 282 aa10.14□□□□□ -0.79
BRCA1-222ENST00000493919 ZNF705GA8MUZ8 300 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-222ENST00000493919 G3V3Y1 287 aa10.14□□□□□ -0.79
BRCA1-222ENST00000493919 SYT7O43581 403 aa10.14□□□□□ -0.79
BRCA1-222ENST00000493919 GNG7O60262 68 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms