RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 TENM1Q9UKZ4 2725 aa18.6■□□□□ 0.57
SNIP1-203ENST00000493916 TRBV2A0A0J9YWF9 115 aa18.59■□□□□ 0.57
SNIP1-203ENST00000493916 F8VVB4 439 aa18.59■□□□□ 0.57
SNIP1-203ENST00000493916 F8VWA3 439 aa18.59■□□□□ 0.57
SNIP1-203ENST00000493916 GNAO1P09471 354 aa18.59■□□□□ 0.57
SNIP1-203ENST00000493916 MYL12AP19105 171 aa18.59■□□□□ 0.57
SNIP1-203ENST00000493916 SLC9A3R2Q15599 337 aa18.59■□□□□ 0.57
SNIP1-203ENST00000493916 RPL22L1Q6P5R6 122 aaKnown RBP18.59■□□□□ 0.57
SNIP1-203ENST00000493916 PARP16Q8N5Y8 322 aa18.59■□□□□ 0.57
SNIP1-203ENST00000493916 DUX5Q96PT3 197 aa18.59■□□□□ 0.57
SNIP1-203ENST00000493916 ZCCHC4Q9H5U6 513 aa18.59■□□□□ 0.57
SNIP1-203ENST00000493916 OR14J1Q9UGF5 321 aa18.59■□□□□ 0.57
SNIP1-203ENST00000493916 ALX3O95076 343 aa18.58■□□□□ 0.56
SNIP1-203ENST00000493916 CYB5AP00167 134 aa18.58■□□□□ 0.56
SNIP1-203ENST00000493916 PIPP12273 146 aaPredicted RBP18.58■□□□□ 0.56
SNIP1-203ENST00000493916 OR13C9Q8NGT0 318 aa18.58■□□□□ 0.56
SNIP1-203ENST00000493916 FBLIM1Q8WUP2 373 aa18.58■□□□□ 0.56
SNIP1-203ENST00000493916 GCDHQ92947 438 aaPredicted RBP18.58■□□□□ 0.56
SNIP1-203ENST00000493916 SLC25A28Q96A46 364 aa18.58■□□□□ 0.56
SNIP1-203ENST00000493916 TMEM80Q96HE8 168 aa18.58■□□□□ 0.56
SNIP1-203ENST00000493916 METTL8Q9H825 291 aaKnown RBP18.58■□□□□ 0.56
SNIP1-203ENST00000493916 SEBOXQ9HB31 216 aaPredicted RBP18.58■□□□□ 0.56
SNIP1-203ENST00000493916 NEK6Q9HC98 313 aa18.58■□□□□ 0.56
SNIP1-203ENST00000493916 SIRT7Q9NRC8 400 aa18.58■□□□□ 0.56
SNIP1-203ENST00000493916 C19orf12Q9NSK7 152 aa18.58■□□□□ 0.56
SNIP1-203ENST00000493916 DHDHQ9UQ10 334 aa18.58■□□□□ 0.56
SNIP1-203ENST00000493916 TK1P04183 234 aa18.57■□□□□ 0.56
SNIP1-203ENST00000493916 OCM2P0CE71 109 aa18.57■□□□□ 0.56
SNIP1-203ENST00000493916 OCMP0CE72 109 aaPredicted RBP18.57■□□□□ 0.56
SNIP1-203ENST00000493916 POU3F4P49335 361 aa18.57■□□□□ 0.56
SNIP1-203ENST00000493916 GTF2A1P52655 376 aaPredicted RBP18.57■□□□□ 0.56
SNIP1-203ENST00000493916 GUCA2AQ02747 115 aa18.57■□□□□ 0.56
SNIP1-203ENST00000493916 SLC34A1Q06495 639 aa18.57■□□□□ 0.56
SNIP1-203ENST00000493916 PDZK1IP1Q13113 114 aa18.57■□□□□ 0.56
SNIP1-203ENST00000493916 BLMHQ13867 455 aa18.57■□□□□ 0.56
SNIP1-203ENST00000493916 CDK5R1Q15078 307 aa18.57■□□□□ 0.56
SNIP1-203ENST00000493916 OR2G6Q5TZ20 316 aa18.57■□□□□ 0.56
SNIP1-203ENST00000493916 NCR3LG1Q68D85 454 aa18.57■□□□□ 0.56
SNIP1-203ENST00000493916 Q6YL49 198 aa18.57■□□□□ 0.56
SNIP1-203ENST00000493916 SERPINA12Q8IW75 414 aa18.57■□□□□ 0.56
SNIP1-203ENST00000493916 FAM185AQ8N0U4 392 aa18.57■□□□□ 0.56
SNIP1-203ENST00000493916 OR5D14Q8NGL3 314 aa18.57■□□□□ 0.56
SNIP1-203ENST00000493916 TNFRSF14Q92956 283 aa18.57■□□□□ 0.56
SNIP1-203ENST00000493916 EMG1Q92979 244 aaKnown RBP18.57■□□□□ 0.56
SNIP1-203ENST00000493916 ZDHHC16Q969W1 377 aa18.57■□□□□ 0.56
SNIP1-203ENST00000493916 CNOT2Q9NZN8 540 aaKnown RBP18.57■□□□□ 0.56
SNIP1-203ENST00000493916 NKX1-2Q9UD57 310 aaPredicted RBP18.57■□□□□ 0.56
SNIP1-203ENST00000493916 RNASEK-C17orf49H0YIS7 233 aa18.56■□□□□ 0.56
SNIP1-203ENST00000493916 K7N7A8 449 aa18.56■□□□□ 0.56
SNIP1-203ENST00000493916 ZNF737O75373 536 aa18.56■□□□□ 0.56
SNIP1-203ENST00000493916 CHRM2P08172 466 aa18.56■□□□□ 0.56
SNIP1-203ENST00000493916 RPL31P62899 125 aaKnown RBP18.56■□□□□ 0.56
SNIP1-203ENST00000493916 COL10A1Q03692 680 aa18.56■□□□□ 0.56
SNIP1-203ENST00000493916 MED21Q13503 144 aa18.56■□□□□ 0.56
SNIP1-203ENST00000493916 XAF1Q6GPH4 301 aa18.56■□□□□ 0.56
SNIP1-203ENST00000493916 LAIR2Q6ISS4 152 aa18.56■□□□□ 0.56
SNIP1-203ENST00000493916 FIP1L1Q6UN15 594 aaKnown RBP18.56■□□□□ 0.56
SNIP1-203ENST00000493916 C12orf54Q6X4T0 127 aa18.56■□□□□ 0.56
SNIP1-203ENST00000493916 OR52N1Q8NH53 320 aa18.56■□□□□ 0.56
SNIP1-203ENST00000493916 TBC1D15Q8TC07 691 aa18.56■□□□□ 0.56
SNIP1-203ENST00000493916 TSEN15Q8WW01 171 aaKnown RBP18.56■□□□□ 0.56
SNIP1-203ENST00000493916 RGP1Q92546 391 aaPredicted RBP18.56■□□□□ 0.56
SNIP1-203ENST00000493916 GGHQ92820 318 aa18.56■□□□□ 0.56
SNIP1-203ENST00000493916 RBFOX1Q9NWB1 397 aaKnown RBP18.56■□□□□ 0.56
SNIP1-203ENST00000493916 BABAM2Q9NXR7 383 aa18.56■□□□□ 0.56
SNIP1-203ENST00000493916 A0A1W2PPH5 198 aa18.55■□□□□ 0.56
SNIP1-203ENST00000493916 EFCAB10A6NFE3 127 aa18.55■□□□□ 0.56
SNIP1-203ENST00000493916 HOXA3O43365 443 aaPredicted RBP18.55■□□□□ 0.56
SNIP1-203ENST00000493916 SULT1B1O43704 296 aa18.55■□□□□ 0.56
SNIP1-203ENST00000493916 BCL3P20749 454 aa18.55■□□□□ 0.56
SNIP1-203ENST00000493916 NPBWR2P48146 333 aa18.55■□□□□ 0.56
SNIP1-203ENST00000493916 PDZD9Q8IXQ8 264 aa18.55■□□□□ 0.56
SNIP1-203ENST00000493916 FAM58AQ8N1B3 248 aa18.55■□□□□ 0.56
SNIP1-203ENST00000493916 PIP4P2Q8N4L2 257 aa18.55■□□□□ 0.56
SNIP1-203ENST00000493916 TMEM86BQ8N661 226 aa18.55■□□□□ 0.56
SNIP1-203ENST00000493916 TFAP2CQ92754 450 aa18.55■□□□□ 0.56
SNIP1-203ENST00000493916 PLCXD1Q9NUJ7 323 aa18.55■□□□□ 0.56
SNIP1-203ENST00000493916 CHCHD3Q9NX63 227 aaKnown RBP18.55■□□□□ 0.56
SNIP1-203ENST00000493916 CLEC2DQ9UHP7 191 aa18.55■□□□□ 0.56
SNIP1-203ENST00000493916 FBN3Q75N90 2809 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 A0A0U1RQK1 487 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 OGG1O15527 345 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 SPRY1O43609 319 aaPredicted RBP18.54■□□□□ 0.56
SNIP1-203ENST00000493916 KDM4BO94953 1096 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 INMTO95050 263 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 MELTFP08582 738 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 HKR1P10072 659 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 ST3GAL4Q11206 333 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 ZNF146Q15072 292 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 SPIN3Q5JUX0 258 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 ZNF529Q6P280 563 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 CRIP3Q6Q6R5 217 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 LDLRAD3Q86YD5 345 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 SAXO1Q8IYX7 474 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 ASCC1Q8N9N2 400 aaKnown RBP18.54■□□□□ 0.56
SNIP1-203ENST00000493916 OR5D13Q8NGL4 314 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 GPR148Q8TDV2 347 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 RFT1Q96AA3 541 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 SMIM19Q96E16 107 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 SPACA5Q96QH8 159 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms