RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	DHRS7C	A6NNS2	312 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	ZNF670-ZNF695	F2Z2N8	137 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	MPZL2	O60487	215 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	SRSF10	O75494	262 aa	Known RBP	12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	OPN1MW	P04001	364 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	TK1	P04183	234 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	OPN1MW2	P0DN77	364 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	OPN1MW3	P0DN78	364 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	MPZ	P25189	248 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	ZNF273	Q14593	569 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	LRRC36	Q1X8D7	754 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	ZNF782	Q6ZMW2	699 aa	Predicted RBP	12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	CALHM1	Q8IU99	346 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	ELMOD2	Q8IZ81	293 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	BATF2	Q8N1L9	274 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	C11orf42	Q8N5U0	333 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	C11orf44	Q8N8P7	122 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	RHOXF1	Q8NHV9	184 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	CFHR4	Q92496	578 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	FOXRED1	Q96CU9	486 aa	Predicted RBP	12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	NKX3-1	Q99801	234 aa	Predicted RBP	12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	HES4	Q9HCC6	221 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170	SNX5	Q9Y5X3	404 aa		12.44	□□□□□ -0.42
MRPL55-231	ENST00000492170		J3QRE1	110 aa		12.43	□□□□□ -0.42
MRPL55-231	ENST00000492170	CHST1	O43916	411 aa		12.43	□□□□□ -0.42
MRPL55-231	ENST00000492170	OR2T7	P0C7T2	308 aa		12.43	□□□□□ -0.42
MRPL55-231	ENST00000492170	VSIG10L2	P0DP72	767 aa		12.43	□□□□□ -0.42
MRPL55-231	ENST00000492170	PIP	P12273	146 aa	Predicted RBP	12.43	□□□□□ -0.42
MRPL55-231	ENST00000492170	PLEKHG7	Q6ZR37	379 aa		12.43	□□□□□ -0.42
MRPL55-231	ENST00000492170	ASCC1	Q8N9N2	400 aa	Known RBP	12.43	□□□□□ -0.42
MRPL55-231	ENST00000492170	OR14K1	Q8NGZ2	314 aa		12.43	□□□□□ -0.42
MRPL55-231	ENST00000492170	PKIB	Q9C010	78 aa		12.43	□□□□□ -0.42
MRPL55-231	ENST00000492170	PLEKHA1	Q9HB21	404 aa		12.43	□□□□□ -0.42
MRPL55-231	ENST00000492170		A0A1B0GTI1	187 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170		A6NIN4	97 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	VGLL3	A8MV65	326 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170		G3V4G9	280 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170		K7N7A8	449 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	MAGEB4	O15481	346 aa	Predicted RBP	12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	IL24	Q13007	206 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170		Q6ZSR3	168 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	SSX6	Q7RTT6	188 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	LHFPL4	Q7Z7J7	247 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	ANGPTL5	Q86XS5	388 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	ZNF555	Q8NEP9	628 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	OR13D1	Q8NGV5	346 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	TRMT10A	Q8TBZ6	339 aa	Known RBP	12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	PIFO	Q8TCI5	191 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	APH1B	Q8WW43	257 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	CDCA4	Q9BXL8	241 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	ABCB10	Q9NRK6	738 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	NKX1-2	Q9UD57	310 aa	Predicted RBP	12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	AASS	Q9UDR5	926 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	MRM2	Q9UI43	246 aa	Known RBP	12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	SLC7A11	Q9UPY5	501 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	SLC22A13	Q9Y226	551 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	TCF19	Q9Y242	345 aa		12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	TBL2	Q9Y4P3	447 aa	Known RBP	12.42	□□□□□ -0.42
MRPL55-231	ENST00000492170	FAM230A	A0A1W2PPH8	454 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170		A0A1W2PQL4	384 aa	Predicted RBP	12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	FAM90A8P	A6NJQ4	464 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	SNTN	A6NMZ2	147 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	C17orf98	A8MV24	154 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	APOL3	O95236	402 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	RBP4	P02753	201 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	ARG1	P05089	322 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	KRT8	P05787	483 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	CHRM2	P08172	466 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	ZNF728	P0DKX0	622 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	CCL1	P22362	96 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	EDDM3B	P56851	147 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	ISL1	P61371	349 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	ERVK11-1	P61568	191 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	ADARB1	P78563	741 aa	Known RBP	12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	COL10A1	Q03692	680 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	ZNF85	Q03923	595 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	ZNF91	Q05481	1191 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	SLC34A1	Q06495	639 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	FAM189A2	Q15884	450 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	BEAN1	Q3B7T3	259 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	PLA1A	Q53H76	456 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	ZNF691	Q5VV52	312 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	TTC23	Q5W5X9	447 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	GDPD3	Q7L5L3	318 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	RPS4Y2	Q8TD47	263 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	RNFT2	Q96EX2	444 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	PITPNC1	Q9UKF7	332 aa		12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	EXOG	Q9Y2C4	368 aa	Known RBP	12.41	□□□□□ -0.42
MRPL55-231	ENST00000492170	ODF3B	A8MYP8	253 aa		12.4	□□□□□ -0.42
MRPL55-231	ENST00000492170	FBXO24	O75426	580 aa		12.4	□□□□□ -0.42
MRPL55-231	ENST00000492170	WBP4	O75554	376 aa	Known RBP	12.4	□□□□□ -0.42
MRPL55-231	ENST00000492170	GATB	O75879	557 aa	Known RBP	12.4	□□□□□ -0.42
MRPL55-231	ENST00000492170	SULT1C4	O75897	302 aa		12.4	□□□□□ -0.42
MRPL55-231	ENST00000492170	RPP14	O95059	124 aa	Known RBP	12.4	□□□□□ -0.42
MRPL55-231	ENST00000492170	DBT	P11182	482 aa	Known RBP	12.4	□□□□□ -0.42
MRPL55-231	ENST00000492170	DLX6	P56179	175 aa		12.4	□□□□□ -0.42
MRPL55-231	ENST00000492170	ACTC1	P68032	377 aa		12.4	□□□□□ -0.42
MRPL55-231	ENST00000492170	ACTA1	P68133	377 aa		12.4	□□□□□ -0.42
MRPL55-231	ENST00000492170	SAMD5	Q5TGI4	173 aa		12.4	□□□□□ -0.42
MRPL55-231	ENST00000492170	HIST2H2BD	Q6DRA6	164 aa		12.4	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms