RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 LIMS3P0CW19 117 aa10.79□□□□□ -0.68
SHC1-211ENST00000490667 LIMS4P0CW20 117 aa10.79□□□□□ -0.68
SHC1-211ENST00000490667 AZGP1P25311 298 aaKnown RBP10.79□□□□□ -0.68
SHC1-211ENST00000490667 RPL31P62899 125 aaKnown RBP10.79□□□□□ -0.68
SHC1-211ENST00000490667 COL10A1Q03692 680 aa10.79□□□□□ -0.68
SHC1-211ENST00000490667 TMEM200BQ69YZ2 307 aa10.79□□□□□ -0.68
SHC1-211ENST00000490667 LHFPL2Q6ZUX7 228 aa10.79□□□□□ -0.68
SHC1-211ENST00000490667 DHRSXQ8N5I4 330 aa10.79□□□□□ -0.68
SHC1-211ENST00000490667 TMEM86BQ8N661 226 aa10.79□□□□□ -0.68
SHC1-211ENST00000490667 OR4M1Q8NGD0 313 aa10.79□□□□□ -0.68
SHC1-211ENST00000490667 OR5AK2Q8NH90 309 aa10.79□□□□□ -0.68
SHC1-211ENST00000490667 CNIH3Q8TBE1 160 aa10.79□□□□□ -0.68
SHC1-211ENST00000490667 TBC1D15Q8TC07 691 aa10.79□□□□□ -0.68
SHC1-211ENST00000490667 SPSB1Q96BD6 273 aa10.79□□□□□ -0.68
SHC1-211ENST00000490667 JAM3Q9BX67 310 aa10.79□□□□□ -0.68
SHC1-211ENST00000490667 FAM234AQ9H0X4 552 aa10.79□□□□□ -0.68
SHC1-211ENST00000490667 UNKLQ9H9P5 680 aaKnown RBP10.79□□□□□ -0.68
SHC1-211ENST00000490667 C19orf12Q9NSK7 152 aa10.79□□□□□ -0.68
SHC1-211ENST00000490667 CAB39Q9Y376 341 aaPredicted RBP10.79□□□□□ -0.68
SHC1-211ENST00000490667 A0A1W2PPH5 198 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 TMEM212A6NML5 194 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 K7N7A8 449 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 NPFFO15130 113 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 ZFPL1O95159 310 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 MT-ND2P03891 347 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 CCDC159P0C7I6 412 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 DCKP27707 260 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 PEX2P28328 305 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 POU3F4P49335 361 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 UBE2E1P51965 193 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 ADARB1P78563 741 aaKnown RBP10.78□□□□□ -0.68
SHC1-211ENST00000490667 PDZK1IP1Q13113 114 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 KLRD1Q13241 179 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 NCR3LG1Q68D85 454 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 Q8IYB0 196 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 FAM58AQ8N1B3 248 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 ASCC1Q8N9N2 400 aaKnown RBP10.78□□□□□ -0.68
SHC1-211ENST00000490667 OR5D13Q8NGL4 314 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 OR13C9Q8NGT0 318 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 HAVCR2Q8TDQ0 301 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 SSMEM1Q8WWF3 244 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 TAF15Q92804 592 aaKnown RBP eCLIP10.78□□□□□ -0.68
SHC1-211ENST00000490667 EMG1Q92979 244 aaKnown RBP10.78□□□□□ -0.68
SHC1-211ENST00000490667 OPALINQ96PE5 141 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 PDCD1LG2Q9BQ51 273 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 CHIAQ9BZP6 476 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 COMMD4Q9H0A8 199 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 ZCCHC4Q9H5U6 513 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 SEBOXQ9HB31 216 aaPredicted RBP10.78□□□□□ -0.68
SHC1-211ENST00000490667 NEK6Q9HC98 313 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 SF3B6Q9Y3B4 125 aaKnown RBP10.78□□□□□ -0.68
SHC1-211ENST00000490667 POMT1Q9Y6A1 747 aa10.78□□□□□ -0.68
SHC1-211ENST00000490667 TRBV2A0A0J9YWF9 115 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 IRGMA1A4Y4 181 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 MEIOCA2RUB1 952 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 FAM181BA6NEQ2 426 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 SPRY1O43609 319 aaPredicted RBP10.77□□□□□ -0.69
SHC1-211ENST00000490667 IGHV4-59P01825 116 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 CRYBA1P05813 215 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 FBP1P09467 338 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 BCL3P20749 454 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 IER3P46695 156 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 NPBWR2P48146 333 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 ETV1P50549 477 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 GTF2A1P52655 376 aaPredicted RBP10.77□□□□□ -0.69
SHC1-211ENST00000490667 FIP1L1Q6UN15 594 aaKnown RBP10.77□□□□□ -0.69
SHC1-211ENST00000490667 TMPRSS11AQ6ZMR5 421 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 LDLRAD3Q86YD5 345 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 SERPINA12Q8IW75 414 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 PNKDQ8N490 385 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 C11orf42Q8N5U0 333 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 SETD9Q8NE22 299 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 OR5D14Q8NGL3 314 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 RFT1Q96AA3 541 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 RBFOX1Q9NWB1 397 aaKnown RBP10.77□□□□□ -0.69
SHC1-211ENST00000490667 DHDHQ9UQ10 334 aa10.77□□□□□ -0.69
SHC1-211ENST00000490667 FBN3Q75N90 2809 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 hCG_1809904A0A1W2PP81 198 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 A0A1W2PPE2 198 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 A0A1W2PR64 198 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 A0A1W2PRV1 198 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 ZNF737O75373 536 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 ALX3O95076 343 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 HAND1O96004 215 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 CALCBP10092 127 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 CCL3L1P16619 93 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 DUSP1P28562 367 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 ACSM1Q08AH1 577 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 IL18R1Q13478 541 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 CCDC58Q4VC31 144 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 OGFRL1Q5TC84 451 aaPredicted RBP10.76□□□□□ -0.69
SHC1-211ENST00000490667 HCP5Q6MZN7 132 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 RPL22L1Q6P5R6 122 aaKnown RBP10.76□□□□□ -0.69
SHC1-211ENST00000490667 GDPD3Q7L5L3 318 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 RNF144BQ7Z419 303 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 PARP16Q8N5Y8 322 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 TMEM80Q96HE8 168 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 SNX22Q96L94 193 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 SPACA5Q96QH8 159 aa10.76□□□□□ -0.69
SHC1-211ENST00000490667 ZNF747Q9BV97 191 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms