RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 SMURF1Q9HCE7 757 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 ACOT13Q9NPJ3 140 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 LRRC42Q9Y546 428 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 SETD2Q9BYW2 2564 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-212ENST00000489728 TRBV23-1A0A0A0MS06 115 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 PNMA8CA0A1B0GUJ8 204 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 MEGF11A6BM72 1044 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 RFPL4AA6NLU0 287 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 RFPL4AL1F8VTS6 287 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 SC5DO75845 299 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 CHRM2P08172 466 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 HOXB4P17483 251 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-212ENST00000489728 SRD5A1P18405 259 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 AMY2BP19961 511 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 GABRA5P31644 462 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 PRDX2P32119 198 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 MTNR1BP49286 362 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 POU3F4P49335 361 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 GMFBP60983 142 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 ZNF146Q15072 292 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 ELP2Q6IA86 826 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 ZNF773Q6PK81 442 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 CRIP3Q6Q6R5 217 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 UNQ9370/PRO34162Q6UXP9 181 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 ASCL4Q6XD76 172 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 FAM58AQ8N1B3 248 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 KIR3DL3Q8N743 410 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 FAM216BQ8N7L0 139 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 OR5T2Q8NGG2 359 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 EMG1Q92979 244 aaKnown RBP9.19□□□□□ -0.94
CPSF7-212ENST00000489728 SLAMF9Q96A28 289 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 SEH1LQ96EE3 360 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 ZNF488Q96MN9 340 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 NUDT16L1Q9BRJ7 211 aaKnown RBP9.19□□□□□ -0.94
CPSF7-212ENST00000489728 C7orf69Q9H7B7 122 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 HMG20AQ9NP66 347 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 PCDHB16Q9NRJ7 776 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 SNTG1Q9NSN8 517 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 IL36GQ9NZH8 169 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 SLC25A10Q9UBX3 287 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-212ENST00000489728 GLS2Q9UI32 602 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 RPUSD1Q9UJJ7 312 aaKnown RBP9.19□□□□□ -0.94
CPSF7-212ENST00000489728 AUP1Q9Y679 476 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 DOCK11Q5JSL3 2073 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 NAV3Q8IVL0 2385 aa9.19□□□□□ -0.94
CPSF7-212ENST00000489728 C22orf46C9J442 243 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 GABRPO00591 440 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 ZNF780AO75290 641 aaPredicted RBP9.18□□□□□ -0.94
CPSF7-212ENST00000489728 PLATP00750 562 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 FSHBP01225 129 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 IFNA2P01563 188 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 TMEM225BP0DP42 221 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 GALP22466 123 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 ZNF93P35789 620 aaPredicted RBP9.18□□□□□ -0.94
CPSF7-212ENST00000489728 SRP14P37108 136 aaKnown RBP9.18□□□□□ -0.94
CPSF7-212ENST00000489728 TGFBR2P37173 567 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 PTGFRP43088 359 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 GABRA2P47869 451 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 EMX1Q04741 257 aaPredicted RBP9.18□□□□□ -0.94
CPSF7-212ENST00000489728 DGUOKQ16854 277 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 C2CD3Q4AC94 2353 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 ACSM3Q53FZ2 586 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 DDI2Q5TDH0 399 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 UBE2UQ5VVX9 321 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 LIPKQ5VXJ0 399 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 BTN2A1Q7KYR7 527 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 PHC2Q8IXK0 858 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 CD177Q8N6Q3 437 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 LY6G5BQ8NDX9 201 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 Q8NFD4 153 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 OR52N4Q8NGI2 321 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 OR51A2Q8NGJ7 313 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 NANPQ8TBE9 248 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 TBC1D15Q8TC07 691 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 ST8SIA4Q92187 359 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 POM121Q96HA1 1249 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 GPER1Q99527 375 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 DCTN5Q9BTE1 182 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 MMP26Q9NRE1 261 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 OPN4Q9UHM6 478 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 MAB21L2Q9Y586 359 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 KPTNQ9Y664 436 aa9.18□□□□□ -0.94
CPSF7-212ENST00000489728 TRAV8-7A0A075B6U6 113 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 IGKV1-12A0A0C4DH73 117 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 SPRY1O43609 319 aaPredicted RBP9.17□□□□□ -0.94
CPSF7-212ENST00000489728 FCN3O75636 299 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 ARL6IP5O75915 188 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 RGS9O75916 674 aaPredicted RBP9.17□□□□□ -0.94
CPSF7-212ENST00000489728 IGKV1D-12P01611 117 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 UCHL1P09936 223 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 HSMCR30P0CW71 290 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 PRKACAP17612 351 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 ADRA2CP18825 462 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 BCL3P20749 454 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 MAP2K4P45985 399 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 NPBWR2P48146 333 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 BPIFB3P59826 476 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 FGF12P61328 243 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 IKZF1Q13422 519 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 GPR176Q14439 515 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms