RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 UBBP0CG47 229 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 IRF2P14316 349 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 PDLIM4P50479 330 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 SCAND1P57086 179 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 TMEM33P57088 247 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 FGF12P61328 243 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 BTG1P62324 171 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 P2RY14Q15391 338 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 SMIM21Q3B7S5 101 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 ZNF404Q494X3 552 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 SLC22A6Q4U2R8 563 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 STUMQ69YW2 141 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 CROCCP3Q8IVE0 287 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 BATF2Q8N1L9 274 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 OR51D1Q8NGF3 324 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 OR51T1Q8NGJ9 327 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 FAM3DQ96BQ1 224 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 DGCR14Q96DF8 476 aaKnown RBP9.13□□□□□ -0.95
TFF3-203ENST00000489676 BPESC1Q9GZL8 116 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 METTL9Q9H1A3 318 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 LIN7BQ9HAP6 207 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 RASL12Q9NYN1 266 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 CCDC59Q9P031 241 aaKnown RBP9.13□□□□□ -0.95
TFF3-203ENST00000489676 GHRLQ9UBU3 117 aa9.13□□□□□ -0.95
TFF3-203ENST00000489676 IGKV1D-17A0A075B6S4 117 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 PPIAL4EA0A075B759 164 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 IGHV3OR15-7A0A075B7D8 119 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 IGHV4-30-2A0A087WSY4 118 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 A0A096LNT2 108 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 TMEM272A0A1B0GTI8 110 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 PPIAL4DF5H284 164 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 NDUFS8O00217 210 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 TNFRSF13BO14836 293 aaPredicted RBP9.12□□□□□ -0.95
TFF3-203ENST00000489676 ZNF780AO75290 641 aaPredicted RBP9.12□□□□□ -0.95
TFF3-203ENST00000489676 NXPH2O95156 264 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 ZNF205O95201 554 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 PAHP00439 452 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 KNG1P01042 644 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 PPIAL4FP0DN26 164 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 SNRPBP14678 240 aaKnown RBP9.12□□□□□ -0.95
TFF3-203ENST00000489676 ARSBP15848 533 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 MUC1P15941 1255 aaPredicted RBP9.12□□□□□ -0.95
TFF3-203ENST00000489676 AMY2BP19961 511 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 GLRA1P23415 457 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 GMFBP60983 142 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 PLA2G7Q13093 441 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 Q5PR19 223 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 OR10K2Q6IF99 312 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 CLEC2AQ6UVW9 174 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 PRSS57Q6UWY2 283 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 OR2W3Q7Z3T1 314 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 FAM58AQ8N1B3 248 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 C19orf18Q8NEA5 215 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 LGALS14Q8TCE9 139 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 FAM168AQ92567 244 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 EMG1Q92979 244 aaKnown RBP9.12□□□□□ -0.95
TFF3-203ENST00000489676 KCTD12Q96CX2 325 aaKnown RBP9.12□□□□□ -0.95
TFF3-203ENST00000489676 Q96M66 194 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 FOXC2Q99958 501 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 SEBOXQ9HB31 216 aaPredicted RBP9.12□□□□□ -0.95
TFF3-203ENST00000489676 OR5V1Q9UGF6 321 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 PPIAL4AQ9Y536 164 aa9.12□□□□□ -0.95
TFF3-203ENST00000489676 A0A0A6YYD4 124 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 PPIHO43447 177 aaKnown RBP9.11□□□□□ -0.95
TFF3-203ENST00000489676 CALCBP10092 127 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 PSG2P11465 335 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 MGMTP16455 207 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 ZNF182P17025 639 aaPredicted RBP9.11□□□□□ -0.95
TFF3-203ENST00000489676 PRKACAP17612 351 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 SERPINA2P20848 420 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 MDH2P40926 338 aaKnown RBP9.11□□□□□ -0.95
TFF3-203ENST00000489676 GPR6P46095 362 aaPredicted RBP9.11□□□□□ -0.95
TFF3-203ENST00000489676 BMXP51813 675 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 CAPZA1P52907 286 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 RBM11P57052 281 aaKnown RBP9.11□□□□□ -0.95
TFF3-203ENST00000489676 DSCR9P59020 149 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 RPS27AP62979 156 aaKnown RBP9.11□□□□□ -0.95
TFF3-203ENST00000489676 DYNC1I2Q13409 638 aaKnown RBP9.11□□□□□ -0.95
TFF3-203ENST00000489676 GPR176Q14439 515 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 IL13RA2Q14627 380 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 ZNF146Q15072 292 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 RSU1Q15404 277 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 CLEC12BQ2HXU8 276 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 C2orf76Q3KRA6 126 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 PIGYQ3MUY2 71 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 TMEM155Q4W5P6 130 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 SPIN3Q5JUX0 258 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 AVPI1Q5T686 147 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 IDNKQ5T6J7 187 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 SFRP4Q6FHJ7 346 aaPredicted RBP9.11□□□□□ -0.95
TFF3-203ENST00000489676 BIVMQ86UB2 503 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 LRRC28Q86X40 367 aaPredicted RBP9.11□□□□□ -0.95
TFF3-203ENST00000489676 OSR2Q8N2R0 312 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 CD177Q8N6Q3 437 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 BOLLQ8N9W6 283 aaKnown RBP9.11□□□□□ -0.95
TFF3-203ENST00000489676 OR5H6Q8NGV6 325 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 ANGPTL6Q8NI99 470 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 SLC25A38Q96DW6 304 aa9.11□□□□□ -0.95
TFF3-203ENST00000489676 MRPS24Q96EL2 167 aaKnown RBP9.11□□□□□ -0.95
TFF3-203ENST00000489676 TMEM246Q9BRR3 403 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms