RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 NQO2P16083 231 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 RGS6P49758 472 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 OR2B6P58173 313 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 OR12D2P58182 307 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 TAS2R60P59551 318 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 PPP1CAP62136 330 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 C2orf54Q08AI8 447 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 BTN1A1Q13410 526 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 TMED1Q13445 227 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 PMVKQ15126 192 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 ZBTB6Q15916 424 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 PSG3Q16557 428 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 CEACAM16Q2WEN9 425 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 CDNFQ49AH0 187 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 TTC32Q5I0X7 151 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 ZNF678Q5SXM1 525 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 MORN3Q6PF18 240 aaPredicted RBP1.14□□□□□ -2.23
CPSF3-205ENST00000489629 TBPL2Q6SJ96 375 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 LRRC8AQ8IWT6 810 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 SELENOHQ8IZQ5 122 aaKnown RBP1.14□□□□□ -2.23
CPSF3-205ENST00000489629 RNF10Q8N5U6 811 aaKnown RBP1.14□□□□□ -2.23
CPSF3-205ENST00000489629 TRIML2Q8N7C3 387 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 SLC26A10Q8NG04 563 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 CLHC1Q8NHS4 586 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 NT5CQ8TCD5 201 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 HGDQ93099 445 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 MRPL48Q96GC5 212 aaKnown RBP1.14□□□□□ -2.23
CPSF3-205ENST00000489629 TMED9Q9BVK6 235 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 MS4A8Q9BY19 250 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 COA1Q9GZY4 146 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 ASB7Q9H672 318 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 TREM1Q9NP99 234 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 IFT46Q9NQC8 304 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 SDHAF2Q9NX18 166 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 IL37Q9NZH6 218 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 KLF13Q9Y2Y9 288 aaPredicted RBP1.14□□□□□ -2.23
CPSF3-205ENST00000489629 ACOT9Q9Y305 439 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 ENPP4Q9Y6X5 453 aa1.14□□□□□ -2.23
CPSF3-205ENST00000489629 YLPM1P49750 1951 aaKnown RBP1.14□□□□□ -2.23
CPSF3-205ENST00000489629 ADGRL1O94910 1474 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 RPRD2Q5VT52 1461 aaKnown RBP1.13□□□□□ -2.23
CPSF3-205ENST00000489629 TMEM94Q12767 1356 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 A0A1B0GXF2 115 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 ZNF593O00488 134 aaPredicted RBP1.13□□□□□ -2.23
CPSF3-205ENST00000489629 CDIPTO14735 213 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 FFAR1O14842 300 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 NEMFO60524 1076 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 CNMDO75829 334 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 IL12BP29460 328 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 MAGEA3P43357 314 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 KCNJ3P48549 501 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 TGM4P49221 684 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 ACOT2P49753 483 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 AQP5P55064 265 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 OR10A3P58181 314 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 LAMTOR4Q0VGL1 99 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 IL15RAQ13261 267 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 STX3Q13277 289 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 TPBGQ13641 420 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 VAMP3Q15836 100 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 FBXL19-AS1Q494R0 122 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 HHATQ5VTY9 493 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 FAM104BQ5XKR9 115 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 CLEC19AQ6UXS0 136 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 TMEM136Q6ZRR5 245 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 AHSA2Q719I0 299 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 PDPNQ86YL7 162 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 BBS7Q8IWZ6 715 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 NELFCDQ8IXH7 590 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 CCNYL1Q8N7R7 359 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 LINC00469Q8N7U9 141 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 C1orf64Q8NEQ6 169 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 OR2K2Q8NGT1 345 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 OR2Y1Q8NGV0 311 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 OR1P1Q8NH06 330 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 ZFAND1Q8TCF1 268 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 CCL17Q92583 94 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 FMC1Q96HJ9 113 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 ZNF396Q96N95 335 aaPredicted RBP1.13□□□□□ -2.23
CPSF3-205ENST00000489629 ACBD6Q9BR61 282 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 C1orf50Q9BV19 199 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 LHX5Q9H2C1 402 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 POMKQ9H5K3 350 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 PRORYQ9H606 182 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 C12orf4Q9NQ89 552 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 OR2S2Q9NQN1 319 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 RWDD2AQ9UIY3 292 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 ANXA10Q9UJ72 324 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 CFAP45Q9UL16 551 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 RAB23Q9ULC3 237 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 SCML1Q9UN30 329 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 AP3M1Q9Y2T2 418 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 ELP1O95163 1332 aa1.13□□□□□ -2.23
CPSF3-205ENST00000489629 A0A0G2JMP0 313 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 A0A0X1KG70 313 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 RBFOX3A6NFN3 312 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 IQCF5A8MTL0 148 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 E7EWF7 191 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 CLDN34H7C241 214 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 M0QXV9 152 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms