RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 CXorf66Q5JRM2 361 aaPredicted RBP7.12□□□□□ -1.27
SSBP1-212ENST00000489378 CEP78Q5JTW2 689 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 NANOGP8Q6NSW7 305 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 SMARCD3Q6STE5 483 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 RRM2BQ7LG56 351 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 SLC35E3Q7Z769 313 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 ZNF429Q86V71 674 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 ZDHHC23Q8IYP9 409 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 Q8N1Y9 231 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 FTMTQ8N4E7 242 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 POC1AQ8NBT0 407 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 OR11H1Q8NG94 326 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 OR51L1Q8NGJ5 315 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 C4orf3Q8WVX3 66 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 TMEM109Q9BVC6 243 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 TMEM120AQ9BXJ8 343 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 RETNQ9HD89 108 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 ABCB9Q9NP78 766 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 DNAJC27Q9NZQ0 273 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 COMMD3-BMI1R4GMX3 469 aa7.12□□□□□ -1.27
SSBP1-212ENST00000489378 ZNF878C9JN71 531 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 H3BSH0 61 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 ARPC3O15145 178 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 SAP30O75446 220 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 IGHG2P01859 326 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 NAT1P18440 290 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 KDELR2P33947 212 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 MTNR1BP49286 362 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 POU3F4P49335 361 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 ARHGDIBP52566 201 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 BDH1Q02338 343 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 SNCBQ16143 134 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 PNLIPRP3Q17RR3 467 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 TPTE2P1Q5T6R2 138 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 ZBTB49Q6ZSB9 765 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 FOXRED2Q8IWF2 684 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 ABHD12Q8N2K0 398 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 RNF152Q8N8N0 203 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 ASCC1Q8N9N2 400 aaKnown RBP7.11□□□□□ -1.27
SSBP1-212ENST00000489378 PROKR2Q8NFJ6 384 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 RHOVQ96L33 236 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 HIST1H2AAQ96QV6 131 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 OR10A2Q9H208 303 aa7.11□□□□□ -1.27
SSBP1-212ENST00000489378 DHRS12A0PJE2 317 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 FAM172BPA6NC97 362 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 A8MZ25 164 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 LEUTXA8MZ59 168 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 B2RBV5 119 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 ANGPT2O15123 496 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 ZNF737O75373 536 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 IGLV1-47P01700 117 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 FAM106CPP0CH98 169 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 CNTFRP26992 372 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 HSD11B1P28845 292 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 GSTT1P30711 240 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 GRB2P62993 217 aaKnown RBP7.1□□□□□ -1.27
SSBP1-212ENST00000489378 FOXE3Q13461 319 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 GPR50Q13585 617 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 GALEQ14376 348 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 EDDM3AQ14507 147 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 SLC35F1Q5T1Q4 408 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 FAM71E2Q8N5Q1 922 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 TPRX1Q8N7U7 411 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 FANK1Q8TC84 345 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 DCUN1D4Q92564 292 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 ST6GALNAC6Q969X2 333 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 PGAM5Q96HS1 289 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 FAM110AQ9BQ89 295 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 NRIP2Q9BQI9 281 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 IFT27Q9BW83 186 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 RGCCQ9H4X1 137 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 KRCC1Q9NPI7 259 aaPredicted RBP7.1□□□□□ -1.27
SSBP1-212ENST00000489378 SLC22A13Q9Y226 551 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 V9GYY5 206 aaPredicted RBP7.1□□□□□ -1.27
SSBP1-212ENST00000489378 FAM90A18PA6NE21 464 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 ARRDC5A6NEK1 342 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 FAM90A16PA6NEW6 464 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 FAM90A20PA6NIJ5 464 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 FAM90A9PA6NNJ1 464 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 FAM90A12PA8MX19 464 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 FAM90A5PA8MXJ8 464 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 LY6LH3BQJ8 138 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 ZNF593O00488 134 aaPredicted RBP7.1□□□□□ -1.27
SSBP1-212ENST00000489378 NXPH2O95156 264 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 OR8U8P0C7N1 319 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 FAM90A15PP0C7V4 464 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 FAM90A13PP0C7W8 464 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 FAM90A14PP0C7W9 464 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 FAM90A24PP0C7X0 464 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 SLC6A6P31641 620 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 SLC15A1P46059 708 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 MEF2CQ06413 473 aaPredicted RBP7.1□□□□□ -1.27
SSBP1-212ENST00000489378 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.1□□□□□ -1.272e-6■□□□□ 8.3
SSBP1-212ENST00000489378 CEACAM21Q3KPI0 293 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 HSP90B2PQ58FF3 399 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 TNFAIP8L3Q5GJ75 292 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 PRAMEF5Q5TYX0 476 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 GDPD3Q7L5L3 318 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 OR1N2Q8NGR9 330 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms