RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 CD177Q8N6Q3 437 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 C3orf56Q8N813 242 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 CNIH3Q8TBE1 160 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 TSEN15Q8WW01 171 aaKnown RBP11.11□□□□□ -0.63
LMO4-203ENST00000489303 SLAMF9Q96A28 289 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 OPALINQ96PE5 141 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 JAM3Q9BX67 310 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 FAM234AQ9H0X4 552 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 METTL8Q9H825 291 aaKnown RBP11.11□□□□□ -0.63
LMO4-203ENST00000489303 FGF20Q9NP95 211 aaPredicted RBP11.11□□□□□ -0.63
LMO4-203ENST00000489303 SIRT7Q9NRC8 400 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 GLS2Q9UI32 602 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 DHDHQ9UQ10 334 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 HSPE1-MOB4S4R3N1 261 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 IGKV1-27A0A075B6S5 117 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 TRBV2A0A0J9YWF9 115 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 MDFIC2A0A1B0GVS7 189 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 HOXA3O43365 443 aaPredicted RBP11.1□□□□□ -0.63
LMO4-203ENST00000489303 CLIC3O95833 236 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 FOXL1Q12952 345 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 CCDC58Q4VC31 144 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 AWAT1Q58HT5 328 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 C16orf87Q6PH81 154 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 METAP1DQ6UB28 335 aaPredicted RBP11.1□□□□□ -0.63
LMO4-203ENST00000489303 Q6YL49 198 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 SERPINA12Q8IW75 414 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 C8orf59Q8N0T1 100 aaPredicted RBP11.1□□□□□ -0.63
LMO4-203ENST00000489303 TMEM86BQ8N661 226 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 ASCC1Q8N9N2 400 aaKnown RBP11.1□□□□□ -0.63
LMO4-203ENST00000489303 OR51A4Q8NGJ6 313 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 OR5D14Q8NGL3 314 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 OR5D13Q8NGL4 314 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 OR13C9Q8NGT0 318 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 EMG1Q92979 244 aaKnown RBP11.1□□□□□ -0.63
LMO4-203ENST00000489303 C1orf147Q96MC9 270 aaPredicted RBP11.1□□□□□ -0.63
LMO4-203ENST00000489303 PRDM13Q9H4Q3 707 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 ZCCHC4Q9H5U6 513 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 ELL3Q9HB65 397 aaPredicted RBP11.1□□□□□ -0.63
LMO4-203ENST00000489303 MTCH1Q9NZJ7 389 aa11.1□□□□□ -0.63
LMO4-203ENST00000489303 EXOSC1Q9Y3B2 195 aaKnown RBP11.1□□□□□ -0.63
LMO4-203ENST00000489303 IGKV1-9A0A0C4DH69 117 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 ANKRD65E5RJM6 399 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 CASQ2O14958 399 aaPredicted RBP11.09□□□□□ -0.63
LMO4-203ENST00000489303 MAGEB3O15480 346 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 KCNAB3O43448 404 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 ZFPL1O95159 310 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 MT-ND2P03891 347 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 TK1P04183 234 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 CRYBA1P05813 215 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 HCKP08631 526 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 LIMS3P0CW19 117 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 LIMS4P0CW20 117 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 HKR1P10072 659 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 CAPGP40121 348 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 CEBPDP49716 269 aaPredicted RBP11.09□□□□□ -0.63
LMO4-203ENST00000489303 ADARB1P78563 741 aaKnown RBP11.09□□□□□ -0.63
LMO4-203ENST00000489303 COL10A1Q03692 680 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 OGFRL1Q5TC84 451 aaPredicted RBP11.09□□□□□ -0.63
LMO4-203ENST00000489303 RPL22L1Q6P5R6 122 aaKnown RBP11.09□□□□□ -0.63
LMO4-203ENST00000489303 ZSCAN4Q8NAM6 433 aaPredicted RBP11.09□□□□□ -0.63
LMO4-203ENST00000489303 OR10AC1Q8NH08 325 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 SSMEM1Q8WWF3 244 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 CPNE2Q96FN4 548 aaPredicted RBP11.09□□□□□ -0.63
LMO4-203ENST00000489303 TMEM80Q96HE8 168 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 ZNF649Q9BS31 505 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 DCLRE1BQ9H816 532 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 DIMT1Q9UNQ2 313 aaKnown RBP11.09□□□□□ -0.63
LMO4-203ENST00000489303 PCDHGB5Q9Y5G0 923 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 POMT1Q9Y6A1 747 aa11.09□□□□□ -0.63
LMO4-203ENST00000489303 MEGF8Q7Z7M0 2845 aa11.08□□□□□ -0.63
LMO4-203ENST00000489303 E9PI62 339 aa11.08□□□□□ -0.64
LMO4-203ENST00000489303 K7N7A8 449 aa11.08□□□□□ -0.64
LMO4-203ENST00000489303 NPFFO15130 113 aa11.08□□□□□ -0.64
LMO4-203ENST00000489303 PAHP00439 452 aa11.08□□□□□ -0.64
LMO4-203ENST00000489303 CD2P06729 351 aa11.08□□□□□ -0.64
LMO4-203ENST00000489303 FBP1P09467 338 aa11.08□□□□□ -0.64
LMO4-203ENST00000489303 UBE2E1P51965 193 aa11.08□□□□□ -0.64
LMO4-203ENST00000489303 PDZK1IP1Q13113 114 aa11.08□□□□□ -0.64
LMO4-203ENST00000489303 GDPD3Q7L5L3 318 aa11.08□□□□□ -0.64
LMO4-203ENST00000489303 FAM58AQ8N1B3 248 aa11.08□□□□□ -0.64
LMO4-203ENST00000489303 Q8N7P7 452 aa11.08□□□□□ -0.64
LMO4-203ENST00000489303 OR4M1Q8NGD0 313 aa11.08□□□□□ -0.64
LMO4-203ENST00000489303 PPP1R35Q8TAP8 253 aa11.08□□□□□ -0.64
LMO4-203ENST00000489303 PDCD1LG2Q9BQ51 273 aa11.08□□□□□ -0.64
LMO4-203ENST00000489303 DPAGT1Q9H3H5 408 aa11.08□□□□□ -0.64
LMO4-203ENST00000489303 UNKLQ9H9P5 680 aaKnown RBP11.08□□□□□ -0.64
LMO4-203ENST00000489303 TNFRSF19Q9NS68 423 aa11.08□□□□□ -0.64
LMO4-203ENST00000489303 C19orf12Q9NSK7 152 aa11.08□□□□□ -0.64
LMO4-203ENST00000489303 SF3B6Q9Y3B4 125 aaKnown RBP11.08□□□□□ -0.64
LMO4-203ENST00000489303 A0A0U1RQK1 487 aa11.07□□□□□ -0.64
LMO4-203ENST00000489303 BTBD17A6NE02 478 aa11.07□□□□□ -0.64
LMO4-203ENST00000489303 EFCAB10A6NFE3 127 aa11.07□□□□□ -0.64
LMO4-203ENST00000489303 RNASEK-C17orf49H0YIS7 233 aa11.07□□□□□ -0.64
LMO4-203ENST00000489303 SULT1B1O43704 296 aa11.07□□□□□ -0.64
LMO4-203ENST00000489303 ALX3O95076 343 aa11.07□□□□□ -0.64
LMO4-203ENST00000489303 HAND1O96004 215 aa11.07□□□□□ -0.64
LMO4-203ENST00000489303 MELTFP08582 738 aa11.07□□□□□ -0.64
LMO4-203ENST00000489303 PRKACAP17612 351 aa11.07□□□□□ -0.64
LMO4-203ENST00000489303 BCL3P20749 454 aa11.07□□□□□ -0.64
LMO4-203ENST00000489303 ETV1P50549 477 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms