RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 TBL1XR1Q9BZK7 514 aa2.58□□□□□ -2
XRN1-213ENST00000489241 ASB7Q9H672 318 aa2.58□□□□□ -2
XRN1-213ENST00000489241 SND1-IT1Q9HBX3 110 aa2.58□□□□□ -2
XRN1-213ENST00000489241 FBXO6Q9NRD1 293 aaPredicted RBP2.58□□□□□ -2
XRN1-213ENST00000489241 EURLQ9NYK6 297 aa2.58□□□□□ -2
XRN1-213ENST00000489241 TAS2R5Q9NYW4 299 aa2.58□□□□□ -2
XRN1-213ENST00000489241 ADAMTSL3P82987 1691 aa2.57□□□□□ -2
XRN1-213ENST00000489241 IGKV2D-24A0A075B6R9 120 aa2.57□□□□□ -2
XRN1-213ENST00000489241 IGHV1-3A0A0C4DH29 117 aa2.57□□□□□ -2
XRN1-213ENST00000489241 A0A1B0GXF2 115 aa2.57□□□□□ -2
XRN1-213ENST00000489241 TOR1AO14656 332 aa2.57□□□□□ -2
XRN1-213ENST00000489241 BET1O15155 118 aa2.57□□□□□ -2
XRN1-213ENST00000489241 SCO1O75880 301 aa2.57□□□□□ -2
XRN1-213ENST00000489241 MPZL1O95297 269 aa2.57□□□□□ -2
XRN1-213ENST00000489241 NELFEP18615 380 aaKnown RBP2.57□□□□□ -2
XRN1-213ENST00000489241 PSMB6P28072 239 aa2.57□□□□□ -2
XRN1-213ENST00000489241 RPA3P35244 121 aaPredicted RBP2.57□□□□□ -2
XRN1-213ENST00000489241 HTR2BP41595 481 aa2.57□□□□□ -2
XRN1-213ENST00000489241 CRATP43155 626 aa2.57□□□□□ -2
XRN1-213ENST00000489241 GCLMP48507 274 aa2.57□□□□□ -2
XRN1-213ENST00000489241 SLC18A1P54219 525 aa2.57□□□□□ -2
XRN1-213ENST00000489241 MAP3K7CLP57077 242 aa2.57□□□□□ -2
XRN1-213ENST00000489241 BAXQ07812 192 aa2.57□□□□□ -2
XRN1-213ENST00000489241 ZNF816Q0VGE8 651 aaPredicted RBP2.57□□□□□ -2
XRN1-213ENST00000489241 RAB31Q13636 194 aa2.57□□□□□ -2
XRN1-213ENST00000489241 MAPRE2Q15555 327 aa2.57□□□□□ -2
XRN1-213ENST00000489241 ABCA11PQ4W5N1 156 aa2.57□□□□□ -2
XRN1-213ENST00000489241 CLLU1OSQ5K130 101 aa2.57□□□□□ -2
XRN1-213ENST00000489241 KCTD16Q68DU8 428 aa2.57□□□□□ -2
XRN1-213ENST00000489241 CD302Q8IX05 232 aa2.57□□□□□ -2
XRN1-213ENST00000489241 BOD1L2Q8IYS8 172 aa2.57□□□□□ -2
XRN1-213ENST00000489241 RNF10Q8N5U6 811 aaKnown RBP2.57□□□□□ -2
XRN1-213ENST00000489241 OR9A2Q8NGT5 310 aa2.57□□□□□ -2
XRN1-213ENST00000489241 ZNF420Q8TAQ5 688 aaPredicted RBP2.57□□□□□ -2
XRN1-213ENST00000489241 NELFBQ8WX92 580 aa2.57□□□□□ -2
XRN1-213ENST00000489241 C22orf15Q8WYQ4 148 aa2.57□□□□□ -2
XRN1-213ENST00000489241 BIRC8Q96P09 236 aa2.57□□□□□ -2
XRN1-213ENST00000489241 MARVELD1Q9BSK0 173 aa2.57□□□□□ -2
XRN1-213ENST00000489241 METTL8Q9H825 291 aaKnown RBP2.57□□□□□ -2
XRN1-213ENST00000489241 DIABLOQ9NR28 239 aa2.57□□□□□ -2
XRN1-213ENST00000489241 SDHAF3Q9NRP4 125 aa2.57□□□□□ -2
XRN1-213ENST00000489241 C15orf41Q9Y2V0 281 aa2.57□□□□□ -2
XRN1-213ENST00000489241 ABCB11O95342 1321 aa2.57□□□□□ -2
XRN1-213ENST00000489241 LOC389332A0A1B0GUA5 103 aa2.56□□□□□ -2
XRN1-213ENST00000489241 GOLGA8IPA6NC78 632 aa2.56□□□□□ -2
XRN1-213ENST00000489241 CRXO43186 299 aaPredicted RBP2.56□□□□□ -2
XRN1-213ENST00000489241 MYO1DO94832 1006 aa2.56□□□□□ -2
XRN1-213ENST00000489241 MAS1P04201 325 aa2.56□□□□□ -2
XRN1-213ENST00000489241 M6PRP20645 277 aa2.56□□□□□ -2
XRN1-213ENST00000489241 NPY1RP25929 384 aa2.56□□□□□ -2
XRN1-213ENST00000489241 TTPAP49638 278 aa2.56□□□□□ -2
XRN1-213ENST00000489241 SKP1P63208 163 aa2.56□□□□□ -2
XRN1-213ENST00000489241 PITPNAQ00169 270 aa2.56□□□□□ -2
XRN1-213ENST00000489241 PIGHQ14442 188 aaPredicted RBP2.56□□□□□ -2
XRN1-213ENST00000489241 ZNF404Q494X3 552 aa2.56□□□□□ -2
XRN1-213ENST00000489241 Q499Y3 187 aa2.56□□□□□ -2
XRN1-213ENST00000489241 ACTBL2Q562R1 376 aa2.56□□□□□ -2
XRN1-213ENST00000489241 CLEC12AQ5QGZ9 265 aa2.56□□□□□ -2
XRN1-213ENST00000489241 FAM222AQ5U5X8 452 aa2.56□□□□□ -2
XRN1-213ENST00000489241 MORN3Q6PF18 240 aaPredicted RBP2.56□□□□□ -2
XRN1-213ENST00000489241 SHISA6Q6ZSJ9 500 aa2.56□□□□□ -2
XRN1-213ENST00000489241 FAM231DQ6ZW35 169 aa2.56□□□□□ -2
XRN1-213ENST00000489241 SPATA24Q86W54 205 aa2.56□□□□□ -2
XRN1-213ENST00000489241 PDPNQ86YL7 162 aa2.56□□□□□ -2
XRN1-213ENST00000489241 SLC35G3Q8N808 338 aa2.56□□□□□ -2
XRN1-213ENST00000489241 SPANXA2-OT1Q8N9U9 137 aa2.56□□□□□ -2
XRN1-213ENST00000489241 OR2Z1Q8NG97 314 aa2.56□□□□□ -2
XRN1-213ENST00000489241 FAM57AQ8TBR7 257 aa2.56□□□□□ -2
XRN1-213ENST00000489241 ACTL9Q8TC94 416 aa2.56□□□□□ -2
XRN1-213ENST00000489241 RNASEH2CQ8TDP1 164 aaKnown RBP2.56□□□□□ -2
XRN1-213ENST00000489241 PHF10Q8WUB8 498 aaKnown RBP2.56□□□□□ -2
XRN1-213ENST00000489241 CCDC127Q96BQ5 260 aa2.56□□□□□ -2
XRN1-213ENST00000489241 LRRC45Q96CN5 670 aa2.56□□□□□ -2
XRN1-213ENST00000489241 FMC1Q96HJ9 113 aa2.56□□□□□ -2
XRN1-213ENST00000489241 GPR82Q96P67 336 aa2.56□□□□□ -2
XRN1-213ENST00000489241 ANGPTL4Q9BY76 406 aa2.56□□□□□ -2
XRN1-213ENST00000489241 SRRQ9GZT4 340 aa2.56□□□□□ -2
XRN1-213ENST00000489241 LHX5Q9H2C1 402 aa2.56□□□□□ -2
XRN1-213ENST00000489241 ZSCAN16Q9H4T2 348 aaPredicted RBP2.56□□□□□ -2
XRN1-213ENST00000489241 POMKQ9H5K3 350 aa2.56□□□□□ -2
XRN1-213ENST00000489241 PARP11Q9NR21 331 aa2.56□□□□□ -2
XRN1-213ENST00000489241 RBM12B-AS1Q9P1G2 102 aa2.56□□□□□ -2
XRN1-213ENST00000489241 RAB22AQ9UL26 194 aa2.56□□□□□ -2
XRN1-213ENST00000489241 NOSIPQ9Y314 301 aaKnown RBP2.56□□□□□ -2
XRN1-213ENST00000489241 INSIG2Q9Y5U4 225 aa2.56□□□□□ -2
XRN1-213ENST00000489241 ELP1O95163 1332 aa2.56□□□□□ -2
XRN1-213ENST00000489241 A0A1B0GTI1 187 aa2.55□□□□□ -2
XRN1-213ENST00000489241 ZNF850A8MQ14 1090 aa2.55□□□□□ -2
XRN1-213ENST00000489241 GOLGA8RI6L899 631 aa2.55□□□□□ -2
XRN1-213ENST00000489241 UBDO15205 165 aa2.55□□□□□ -2
XRN1-213ENST00000489241 FABP7O15540 132 aa2.55□□□□□ -2
XRN1-213ENST00000489241 CBR3O75828 277 aa2.55□□□□□ -2
XRN1-213ENST00000489241 CDK1P06493 297 aa2.55□□□□□ -2
XRN1-213ENST00000489241 CD28P10747 220 aa2.55□□□□□ -2
XRN1-213ENST00000489241 TSPOP30536 169 aa2.55□□□□□ -2
XRN1-213ENST00000489241 TGFBR1P36897 503 aa2.55□□□□□ -2
XRN1-213ENST00000489241 LGALS7P47929 136 aa2.55□□□□□ -2
XRN1-213ENST00000489241 ACOT2P49753 483 aa2.55□□□□□ -2
XRN1-213ENST00000489241 EIF4EBP1Q13541 118 aaPredicted RBP2.55□□□□□ -2
XRN1-213ENST00000489241 SP6Q3SY56 376 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms