RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 CBX1P83916 185 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 SNAPC1Q16533 368 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 C9orf66Q5T8R8 295 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 PLBD1Q6P4A8 553 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 ASRGL1Q7L266 308 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 ANGPTL5Q86XS5 388 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 SBSPONQ8IVN8 264 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 ZNF695Q8IW36 515 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 OR8H2Q8N162 312 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 CDRT15Q96T59 188 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 TEAD3Q99594 435 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 IL1RAPQ9NPH3 570 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 GPR173Q9NS66 373 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 FAM206AQ9NX38 181 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 SCOCQ9UIL1 159 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 LINC00527Q9UJ94 153 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 LYVE1Q9Y5Y7 322 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 LINC00312Q9Y6C7 94 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 KIAA2026Q5HYC2 2103 aa12.76□□□□□ -0.37
USP48-210ENST00000489108 LEUTXA8MZ59 168 aa12.76□□□□□ -0.37
USP48-210ENST00000489108 F8VVB4 439 aa12.76□□□□□ -0.37
USP48-210ENST00000489108 F8VWA3 439 aa12.76□□□□□ -0.37
USP48-210ENST00000489108 M0QZK8 103 aa12.76□□□□□ -0.37
USP48-210ENST00000489108 PSMD9O00233 223 aa12.76□□□□□ -0.37
USP48-210ENST00000489108 TNFRSF11BO00300 401 aa12.76□□□□□ -0.37
USP48-210ENST00000489108 KRT36O76013 467 aa12.76□□□□□ -0.37
USP48-210ENST00000489108 ARHGDIBP52566 201 aa12.76□□□□□ -0.37
USP48-210ENST00000489108 HCCSP53701 268 aa12.76□□□□□ -0.37
USP48-210ENST00000489108 BDH1Q02338 343 aa12.76□□□□□ -0.37
USP48-210ENST00000489108 ZFAND6Q6FIF0 208 aa12.76□□□□□ -0.37
USP48-210ENST00000489108 KRT77Q7Z794 578 aa12.76□□□□□ -0.37
USP48-210ENST00000489108 CHPT1Q8WUD6 406 aa12.76□□□□□ -0.37
USP48-210ENST00000489108 ITFG2Q969R8 447 aa12.76□□□□□ -0.37
USP48-210ENST00000489108 SNX22Q96L94 193 aa12.76□□□□□ -0.37
USP48-210ENST00000489108 TMEM269A0A1B0GVZ9 245 aa12.75□□□□□ -0.37
USP48-210ENST00000489108 ACOD1A6NK06 481 aa12.75□□□□□ -0.37
USP48-210ENST00000489108 IGLV3-1P01715 115 aa12.75□□□□□ -0.37
USP48-210ENST00000489108 MPZP25189 248 aa12.75□□□□□ -0.37
USP48-210ENST00000489108 PPP1R8Q12972 351 aaKnown RBP12.75□□□□□ -0.37
USP48-210ENST00000489108 MEPCEQ7L2J0 689 aaKnown RBP12.75□□□□□ -0.37
USP48-210ENST00000489108 AQP11Q8NBQ7 271 aa12.75□□□□□ -0.37
USP48-210ENST00000489108 OR52N4Q8NGI2 321 aa12.75□□□□□ -0.37
USP48-210ENST00000489108 PBOV1Q9GZY1 135 aa12.75□□□□□ -0.37
USP48-210ENST00000489108 FAM172BPA6NC97 362 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 ARRDC5A6NEK1 342 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 A6NIN4 97 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 SEC14L6B5MCN3 397 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 INMTO95050 263 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 CCNB2O95067 398 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 IGLV1-47P01700 117 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 IGHA1P01876 353 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 ALOX5APP20292 161 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 DEFB136Q30KP8 78 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 CLVS2Q5SYC1 327 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 PRAMEF5Q5TYX0 476 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 LCN1P1Q5VSP4 162 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 TMEM42Q69YG0 159 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 RTN4RL2Q86UN3 420 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 EGFL6Q8IUX8 553 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 IQCF1Q8N6M8 205 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 OR5M8Q8NGP6 311 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 ZNF596Q8TC21 504 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 CHST6Q9GZX3 395 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 SPAG4Q9NPE6 437 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 MTCH1Q9NZJ7 389 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 ZNF256Q9Y2P7 627 aaPredicted RBP12.74□□□□□ -0.37
USP48-210ENST00000489108 MOB4Q9Y3A3 225 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 SMAD5-AS1Q9Y6J3 95 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 HSPE1-MOB4S4R3N1 261 aa12.74□□□□□ -0.37
USP48-210ENST00000489108 SERPINE3A8MV23 424 aa12.73□□□□□ -0.37
USP48-210ENST00000489108 DHRS3O75911 302 aa12.73□□□□□ -0.37
USP48-210ENST00000489108 PEX2P28328 305 aa12.73□□□□□ -0.37
USP48-210ENST00000489108 ESRRGP62508 458 aa12.73□□□□□ -0.37
USP48-210ENST00000489108 IL24Q13007 206 aa12.73□□□□□ -0.37
USP48-210ENST00000489108 GRK1Q15835 563 aa12.73□□□□□ -0.37
USP48-210ENST00000489108 TPTE2P1Q5T6R2 138 aa12.73□□□□□ -0.37
USP48-210ENST00000489108 TRAPPC6BQ86SZ2 158 aa12.73□□□□□ -0.37
USP48-210ENST00000489108 NSMCE2Q96MF7 247 aa12.73□□□□□ -0.37
USP48-210ENST00000489108 PKIBQ9C010 78 aa12.73□□□□□ -0.37
USP48-210ENST00000489108 DCLRE1BQ9H816 532 aa12.73□□□□□ -0.37
USP48-210ENST00000489108 DNAJB9Q9UBS3 223 aa12.73□□□□□ -0.37
USP48-210ENST00000489108 SORL1Q92673 2214 aa12.72□□□□□ -0.37
USP48-210ENST00000489108 LY6LH3BQJ8 138 aa12.72□□□□□ -0.37
USP48-210ENST00000489108 BUB1B-PAK6H3BSN5 160 aa12.72□□□□□ -0.37
USP48-210ENST00000489108 DLGAP1O14490 977 aa12.72□□□□□ -0.37
USP48-210ENST00000489108 PSPNO60542 156 aa12.72□□□□□ -0.37
USP48-210ENST00000489108 LY86O95711 162 aa12.72□□□□□ -0.37
USP48-210ENST00000489108 FAM106CPP0CH98 169 aa12.72□□□□□ -0.37
USP48-210ENST00000489108 GABRR1P24046 479 aa12.72□□□□□ -0.37
USP48-210ENST00000489108 GDNFP39905 211 aa12.72□□□□□ -0.37
USP48-210ENST00000489108 SLC35B1P78383 322 aa12.72□□□□□ -0.37
USP48-210ENST00000489108 OR52W1Q6IF63 320 aa12.72□□□□□ -0.37
USP48-210ENST00000489108 ADAMTSL5Q6ZMM2 481 aa12.72□□□□□ -0.37
USP48-210ENST00000489108 LCNL1Q6ZST4 164 aa12.72□□□□□ -0.37
USP48-210ENST00000489108 OVCH2Q7RTZ1 564 aa12.72□□□□□ -0.37
USP48-210ENST00000489108 COMMD1Q8N668 190 aa12.72□□□□□ -0.37
USP48-210ENST00000489108 TRMT10AQ8TBZ6 339 aaKnown RBP12.72□□□□□ -0.37
USP48-210ENST00000489108 CEP19Q96LK0 163 aa12.72□□□□□ -0.37
USP48-210ENST00000489108 ZNF286AQ9HBT8 521 aa12.72□□□□□ -0.37
USP48-210ENST00000489108 MAGEL2Q9UJ55 1249 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms