RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 NDUFA11Q86Y39 141 aa14.85□□□□□ -0.03
HDAC6-231ENST00000488905 OR11H6Q8NGC7 330 aa14.85□□□□□ -0.03
HDAC6-231ENST00000488905 ZNF714Q96N38 554 aa14.85□□□□□ -0.03
HDAC6-231ENST00000488905 MMP28Q9H239 520 aa14.85□□□□□ -0.03
HDAC6-231ENST00000488905 FAM230AA0A1W2PPH8 454 aa14.84□□□□□ -0.03
HDAC6-231ENST00000488905 CHRM2P08172 466 aa14.84□□□□□ -0.03
HDAC6-231ENST00000488905 DNAL1Q4LDG9 190 aa14.84□□□□□ -0.03
HDAC6-231ENST00000488905 OXLD1Q5BKU9 147 aa14.84□□□□□ -0.03
HDAC6-231ENST00000488905 AADACL4Q5VUY2 407 aa14.84□□□□□ -0.03
HDAC6-231ENST00000488905 OR8H2Q8N162 312 aa14.84□□□□□ -0.03
HDAC6-231ENST00000488905 TCEANCQ8N8B7 351 aa14.84□□□□□ -0.03
HDAC6-231ENST00000488905 OR4F17Q8NGA8 305 aa14.84□□□□□ -0.03
HDAC6-231ENST00000488905 TMEM163Q8TC26 289 aa14.84□□□□□ -0.03
HDAC6-231ENST00000488905 R3HDM4Q96D70 268 aa14.84□□□□□ -0.03
HDAC6-231ENST00000488905 CEP19Q96LK0 163 aa14.84□□□□□ -0.03
HDAC6-231ENST00000488905 OR4F4Q96R69 305 aa14.84□□□□□ -0.03
HDAC6-231ENST00000488905 CADM1Q9BY67 442 aaKnown RBP14.84□□□□□ -0.03
HDAC6-231ENST00000488905 PRSS22Q9GZN4 317 aa14.84□□□□□ -0.03
HDAC6-231ENST00000488905 SLC7A11Q9UPY5 501 aa14.84□□□□□ -0.03
HDAC6-231ENST00000488905 IGKV1-27A0A075B6S5 117 aa14.83□□□□□ -0.04
HDAC6-231ENST00000488905 ADARB2-AS1A8MUL3 147 aa14.83□□□□□ -0.04
HDAC6-231ENST00000488905 F8VVB4 439 aa14.83□□□□□ -0.04
HDAC6-231ENST00000488905 F8VWA3 439 aa14.83□□□□□ -0.04
HDAC6-231ENST00000488905 F2RL2O00254 374 aa14.83□□□□□ -0.04
HDAC6-231ENST00000488905 PEX14O75381 377 aa14.83□□□□□ -0.04
HDAC6-231ENST00000488905 RPP14O95059 124 aaKnown RBP14.83□□□□□ -0.04
HDAC6-231ENST00000488905 DYNLT3P51808 116 aa14.83□□□□□ -0.04
HDAC6-231ENST00000488905 EMX1Q04741 257 aaPredicted RBP14.83□□□□□ -0.04
HDAC6-231ENST00000488905 DYNC1I2Q13409 638 aaKnown RBP14.83□□□□□ -0.04
HDAC6-231ENST00000488905 ODF4Q2M2E3 257 aa14.83□□□□□ -0.04
HDAC6-231ENST00000488905 SLX4IPQ5VYV7 408 aa14.83□□□□□ -0.04
HDAC6-231ENST00000488905 SSX6Q7RTT6 188 aa14.83□□□□□ -0.04
HDAC6-231ENST00000488905 GID4Q8IVV7 300 aa14.83□□□□□ -0.04
HDAC6-231ENST00000488905 SLAMF9Q96A28 289 aa14.83□□□□□ -0.04
HDAC6-231ENST00000488905 CITED2Q99967 270 aaPredicted RBP14.83□□□□□ -0.04
HDAC6-231ENST00000488905 WNT10AQ9GZT5 417 aa14.83□□□□□ -0.04
HDAC6-231ENST00000488905 KRT84Q9NSB2 600 aa14.83□□□□□ -0.04
HDAC6-231ENST00000488905 MTCH1Q9NZJ7 389 aa14.83□□□□□ -0.04
HDAC6-231ENST00000488905 H2AFY2Q9P0M6 372 aaPredicted RBP14.83□□□□□ -0.04
HDAC6-231ENST00000488905 POMPQ9Y244 141 aa14.83□□□□□ -0.04
HDAC6-231ENST00000488905 ZAR1LA6NP61 321 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 H3BSH0 61 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 GYG2O15488 501 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 GATBO75879 557 aaKnown RBP14.82□□□□□ -0.04
HDAC6-231ENST00000488905 KRT8P05787 483 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 EPHA2P29317 976 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 OR12D2P58182 307 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 ACTA2P62736 377 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 ACTG2P63267 376 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 ACTC1P68032 377 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 ACTA1P68133 377 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 EFNB1P98172 346 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 MEF2CQ06413 473 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-231ENST00000488905 EDDM3AQ14507 147 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 UBE2V2Q15819 145 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 TMEM95Q3KNT9 176 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 ARSJQ5FYB0 599 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-231ENST00000488905 C12orf73Q69YU5 71 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 CATSPERDQ86XM0 798 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 YIPF7Q8N8F6 280 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 MRAPQ8TCY5 172 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 UTP4Q969X6 686 aaKnown RBP14.82□□□□□ -0.04
HDAC6-231ENST00000488905 SNX22Q96L94 193 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 OR5M11Q96RB7 305 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 TBX5Q99593 518 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 CHST5Q9GZS9 411 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 NECAP2Q9NVZ3 263 aa14.82□□□□□ -0.04
HDAC6-231ENST00000488905 IGHV2-26A0A0B4J1V2 119 aa14.81□□□□□ -0.04
HDAC6-231ENST00000488905 hADV38S2A0JD32 116 aa14.81□□□□□ -0.04
HDAC6-231ENST00000488905 TMEM82A0PJX8 343 aa14.81□□□□□ -0.04
HDAC6-231ENST00000488905 SYT7O43581 403 aa14.81□□□□□ -0.04
HDAC6-231ENST00000488905 MITFO75030 526 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-231ENST00000488905 JUNBP17275 347 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-231ENST00000488905 VDAC2P45880 294 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-231ENST00000488905 MINOS1Q5TGZ0 78 aa14.81□□□□□ -0.04
HDAC6-231ENST00000488905 SLC25A26Q70HW3 274 aa14.81□□□□□ -0.04
HDAC6-231ENST00000488905 ZNF676Q8N7Q3 588 aa14.81□□□□□ -0.04
HDAC6-231ENST00000488905 EMG1Q92979 244 aaKnown RBP14.81□□□□□ -0.04
HDAC6-231ENST00000488905 PHF21AQ96BD5 680 aa14.81□□□□□ -0.04
HDAC6-231ENST00000488905 IL4I1Q96RQ9 567 aa14.81□□□□□ -0.04
HDAC6-231ENST00000488905 ZNF281Q9Y2X9 895 aa14.81□□□□□ -0.04
HDAC6-231ENST00000488905 HILPDAQ9Y5L2 63 aa14.81□□□□□ -0.04
HDAC6-231ENST00000488905 LINC00312Q9Y6C7 94 aa14.81□□□□□ -0.04
HDAC6-231ENST00000488905 SESN1Q9Y6P5 492 aa14.81□□□□□ -0.04
HDAC6-231ENST00000488905 MINOS1-NBL1R4GNA1 71 aa14.81□□□□□ -0.04
HDAC6-231ENST00000488905 DNAJC8O75937 253 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-231ENST00000488905 INMTO95050 263 aa14.8□□□□□ -0.04
HDAC6-231ENST00000488905 HAND1O96004 215 aa14.8□□□□□ -0.04
HDAC6-231ENST00000488905 ALDOBP05062 364 aa14.8□□□□□ -0.04
HDAC6-231ENST00000488905 FUT6P51993 359 aa14.8□□□□□ -0.04
HDAC6-231ENST00000488905 SLC34A1Q06495 639 aa14.8□□□□□ -0.04
HDAC6-231ENST00000488905 Q6ZS46 218 aa14.8□□□□□ -0.04
HDAC6-231ENST00000488905 Q8IYB0 196 aa14.8□□□□□ -0.04
HDAC6-231ENST00000488905 TPRX1Q8N7U7 411 aa14.8□□□□□ -0.04
HDAC6-231ENST00000488905 NDNFQ8TB73 568 aa14.8□□□□□ -0.04
HDAC6-231ENST00000488905 SGCDQ92629 289 aa14.8□□□□□ -0.04
HDAC6-231ENST00000488905 BORCS8Q96FH0 119 aa14.8□□□□□ -0.04
HDAC6-231ENST00000488905 AURKAIP1Q9NWT8 199 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-231ENST00000488905 IL36RNQ9UBH0 155 aa14.8□□□□□ -0.04
HDAC6-231ENST00000488905 COL7A1Q02388 2944 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms