RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 RBMS3Q6XE24 437 aaKnown RBP13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 TMPRSS11AQ6ZMR5 421 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 LHFPL2Q6ZUX7 228 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 VMO1Q7Z5L0 202 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 OR13C9Q8NGT0 318 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 LHX4Q969G2 390 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 OPALINQ96PE5 141 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 ZCCHC4Q9H5U6 513 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 SEBOXQ9HB31 216 aaPredicted RBP13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 PLCXD1Q9NUJ7 323 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 BABAM2Q9NXR7 383 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 ONECUT1Q9UBC0 465 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 PSORS1C1Q9UIG5 152 aa13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 EXOSC1Q9Y3B2 195 aaKnown RBP13.1□□□□□ -0.31
CTDSP1-209ENST00000488627 TRBV23-1A0A0A0MS06 115 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 IGKV1-12A0A0C4DH73 117 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 DNAJC9-AS1A6NH13 148 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 CLDN34H7C241 214 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 XPNPEP2O43895 674 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 ZNF737O75373 536 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 INMTO95050 263 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 IGKV1D-12P01611 117 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 PIPP12273 146 aaPredicted RBP13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 DLX1P56177 255 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 BAMBIQ13145 260 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 SLC9A3R2Q15599 337 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 ZNF529Q6P280 563 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 METAP1DQ6UB28 335 aaPredicted RBP13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 SERPINA12Q8IW75 414 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 PIP4P2Q8N4L2 257 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 OR52N1Q8NH53 320 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 GATAD2BQ8WXI9 593 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 DUX5Q96PT3 197 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 SPACA5Q96QH8 159 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 COMMD4Q9H0A8 199 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 UNKLQ9H9P5 680 aaKnown RBP13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 SIRT7Q9NRC8 400 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 C19orf12Q9NSK7 152 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 RBFOX1Q9NWB1 397 aaKnown RBP13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 FKBP14Q9NWM8 211 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 IL36RNQ9UBH0 155 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 OR14J1Q9UGF5 321 aa13.09□□□□□ -0.31
CTDSP1-209ENST00000488627 TMEM89A2RUT3 159 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 EFCAB10A6NFE3 127 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 ERICH4A6NGS2 130 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 RNASEK-C17orf49H0YIS7 233 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 H0YJX3 145 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 K7N7A8 449 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 M0R1W7 72 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 SLC1A7O00341 560 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 SPRY1O43609 319 aaPredicted RBP13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 TK1P04183 234 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 CHRM2P08172 466 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 MYL12AP19105 171 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 BCL3P20749 454 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 COL10A1Q03692 680 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 PRB3Q04118 309 aaPredicted RBP13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 TMEM200BQ69YZ2 307 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 PDZD9Q8IXQ8 264 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 MKXQ8IYA7 352 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 CMTM4Q8IZR5 234 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 C11orf42Q8N5U0 333 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 OR5D14Q8NGL3 314 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 RFT1Q96AA3 541 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 FAM234AQ9H0X4 552 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 VCXQ9H320 206 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 CNOT2Q9NZN8 540 aaKnown RBP13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 DHDHQ9UQ10 334 aa13.08□□□□□ -0.32
CTDSP1-209ENST00000488627 TMEM82A0PJX8 343 aa13.07□□□□□ -0.32
CTDSP1-209ENST00000488627 ANGPTL7O43827 346 aa13.07□□□□□ -0.32
CTDSP1-209ENST00000488627 C21orf33P30042 268 aaPredicted RBP13.07□□□□□ -0.32
CTDSP1-209ENST00000488627 POU3F4P49335 361 aa13.07□□□□□ -0.32
CTDSP1-209ENST00000488627 COMPP49747 757 aaPredicted RBP13.07□□□□□ -0.32
CTDSP1-209ENST00000488627 CAPZA1P52907 286 aa13.07□□□□□ -0.32
CTDSP1-209ENST00000488627 AQP4P55087 323 aa13.07□□□□□ -0.32
CTDSP1-209ENST00000488627 DOC2BQ14184 412 aa13.07□□□□□ -0.32
CTDSP1-209ENST00000488627 DMKNQ6E0U4 476 aaPredicted RBP13.07□□□□□ -0.32
CTDSP1-209ENST00000488627 HCP5Q6MZN7 132 aa13.07□□□□□ -0.32
CTDSP1-209ENST00000488627 Q6YL49 198 aa13.07□□□□□ -0.32
CTDSP1-209ENST00000488627 Q8IYB0 196 aa13.07□□□□□ -0.32
CTDSP1-209ENST00000488627 FAM58AQ8N1B3 248 aa13.07□□□□□ -0.32
CTDSP1-209ENST00000488627 BPIFB6Q8NFQ5 453 aa13.07□□□□□ -0.32
CTDSP1-209ENST00000488627 METTL8Q9H825 291 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-209ENST00000488627 A0A1W2PQ09 198 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 SULT1B1O43704 296 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 KDM4BO94953 1096 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 RNASE1P07998 156 aaKnown RBP13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 CALCBP10092 127 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 SOX2P48431 317 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 ZP1P60852 638 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 RPL31P62899 125 aaKnown RBP13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 ZNF146Q15072 292 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 KISS1Q15726 138 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 C17orf107Q6ZR85 190 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 SAXO1Q8IYX7 474 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 OR4M1Q8NGD0 313 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 OR51A2Q8NGJ7 313 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 OR5D18Q8NGL1 313 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 GPR148Q8TDV2 347 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 TSEN15Q8WW01 171 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms