RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 AK3Q9UIJ7 227 aa10.8□□□□□ -0.68
TMEM39B-208ENST00000487305 LSM5Q9Y4Y9 91 aaKnown RBP10.8□□□□□ -0.68
TMEM39B-208ENST00000487305 IGHV1-45A0A0A0MS14 117 aa10.79□□□□□ -0.68
TMEM39B-208ENST00000487305 IGHEP01854 428 aa10.79□□□□□ -0.68
TMEM39B-208ENST00000487305 MBPP02686 304 aaPredicted RBP10.79□□□□□ -0.68
TMEM39B-208ENST00000487305 OPN1LWP04000 364 aa10.79□□□□□ -0.68
TMEM39B-208ENST00000487305 TCN2P20062 427 aa10.79□□□□□ -0.68
TMEM39B-208ENST00000487305 MALLQ13021 153 aa10.79□□□□□ -0.68
TMEM39B-208ENST00000487305 TRA2AQ13595 282 aaKnown RBP eCLIP10.79□□□□□ -0.68
TMEM39B-208ENST00000487305 RAET1LQ5VY80 246 aa10.79□□□□□ -0.68
TMEM39B-208ENST00000487305 OSR2Q8N2R0 312 aa10.79□□□□□ -0.68
TMEM39B-208ENST00000487305 NPRL2Q8WTW4 380 aa10.79□□□□□ -0.68
TMEM39B-208ENST00000487305 MARS2Q96GW9 593 aaKnown RBP10.79□□□□□ -0.68
TMEM39B-208ENST00000487305 CCDC74BQ96LY2 380 aa10.79□□□□□ -0.68
TMEM39B-208ENST00000487305 RSRP1Q9BUV0 290 aa10.79□□□□□ -0.68
TMEM39B-208ENST00000487305 PRR13Q9NZ81 148 aa10.79□□□□□ -0.68
TMEM39B-208ENST00000487305 CDH23Q9H251 3354 aa10.79□□□□□ -0.68
TMEM39B-208ENST00000487305 C9J4A7 227 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 XRCC2O43543 280 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 ZIC3O60481 467 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 PDCD6O75340 191 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 NRASP01111 189 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 S100A9P06702 114 aaKnown RBP10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 HERV-K104P61576 105 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 CCL7P80098 99 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 GUK1Q16774 197 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 FOXRED2Q8IWF2 684 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 ZIC4Q8N9L1 334 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 Q8NFD4 153 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 MALSU1Q96EH3 234 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 ZNF385AQ96PM9 386 aaKnown RBP10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 IER2Q9BTL4 223 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 FAAP24Q9BTP7 215 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 ADAT1Q9BUB4 502 aaKnown RBP10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 SLC2A9Q9NRM0 540 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 TMEM38BQ9NVV0 291 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 MRPS18CQ9Y3D5 142 aaKnown RBP10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 IGKV1D-8A0A087WSZ0 117 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 A0A1W2PQM1 296 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 S100A6P06703 90 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 RCC1P18754 421 aaPredicted RBP10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 SRD5A2P31213 254 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 RPL35P42766 123 aaKnown RBP10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 KCNJ3P48549 501 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 CAMLGP49069 296 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 RND3P61587 244 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 PHYHD1Q5SRE7 291 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 FBXW12Q6X9E4 464 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 WDR5BQ86VZ2 330 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 MAFIPQ8WZ33 124 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 CLDN23Q96B33 292 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 FBXO17Q96EF6 278 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 SLC25A31Q9H0C2 315 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 SLC35B3Q9H1N7 401 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 HIPK2Q9H2X6 1198 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 GPR173Q9NS66 373 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 C19orf12Q9NSK7 152 aa10.78□□□□□ -0.68
TMEM39B-208ENST00000487305 ASCC3Q8N3C0 2202 aaKnown RBP10.77□□□□□ -0.68
TMEM39B-208ENST00000487305 ABCA7Q8IZY2 2146 aa10.77□□□□□ -0.68
TMEM39B-208ENST00000487305 NSG1A0A0A6YYJ2 146 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 OR5AC1P0C628 307 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 OR8U9P0C7N5 309 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 FUT3P21217 361 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 LMO1P25800 156 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 CLDN15P56746 228 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 FOXL2P58012 376 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 TAF9Q16594 264 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 PRAMEF20Q5VT98 475 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 GUSBP11Q6P575 273 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 SAXO1Q8IYX7 474 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 OR8U1Q8NH10 309 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 MSI2Q96DH6 328 aaKnown RBP10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 AKR1E2Q96JD6 320 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 CABIN1Q9Y6J0 2220 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 ZNF816-ZNF321PA0A0X1KG74 233 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 LINC01387J3KSC0 135 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 HSPA12AO43301 675 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 LCATP04180 440 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 CTXN2P0C2S0 81 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 AGAP20933 346 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 NFYBP25208 207 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 MAS1LP35410 378 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 CXCL12P48061 93 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 FOXO1Q12778 655 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 SNAI3Q3KNW1 292 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 MIDNQ504T8 468 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 FAM219AQ8IW50 185 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 MESP1Q9BRJ9 268 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 KCNJ16Q9NPI9 418 aa10.77□□□□□ -0.69
TMEM39B-208ENST00000487305 FAM230AA0A1W2PPH8 454 aa10.76□□□□□ -0.69
TMEM39B-208ENST00000487305 UBE2CO00762 179 aa10.76□□□□□ -0.69
TMEM39B-208ENST00000487305 DIRAS3O95661 229 aa10.76□□□□□ -0.69
TMEM39B-208ENST00000487305 SCGB1D2O95969 90 aa10.76□□□□□ -0.69
TMEM39B-208ENST00000487305 F12P00748 615 aaPredicted RBP10.76□□□□□ -0.69
TMEM39B-208ENST00000487305 MYF5P13349 255 aa10.76□□□□□ -0.69
TMEM39B-208ENST00000487305 ANOS1P23352 680 aa10.76□□□□□ -0.69
TMEM39B-208ENST00000487305 PPT1P50897 306 aa10.76□□□□□ -0.69
TMEM39B-208ENST00000487305 BAXQ07812 192 aa10.76□□□□□ -0.69
TMEM39B-208ENST00000487305 SMAD2Q15796 467 aaKnown RBP10.76□□□□□ -0.69
TMEM39B-208ENST00000487305 DPPA3Q6W0C5 159 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms