RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 ACER3Q9NUN7 267 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 FGFR1OP2Q9NVK5 253 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 TRAPPC4Q9Y296 219 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 NUBP2Q9Y5Y2 271 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 MED12LQ86YW9 2145 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 A0A1B0GW55 424 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 RFPL4AA6NLU0 287 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 DEFB108AA8MXU0 73 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 FTCDNL1E5RQL4 147 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 RFPL4AL1F8VTS6 287 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 BLOC1S5-TXNDC5H3BN57 136 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 LRATO95237 230 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 PMS2P2O95744 297 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 IGF2P01344 180 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 ORM1P02763 201 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 DUX4L2P0CJ85 424 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 DUX4L3P0CJ86 424 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 DUX4L4P0CJ87 422 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 DUX4L5P0CJ88 424 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 DUX4L6P0CJ89 424 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 DUX4L7P0CJ90 424 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 COX5AP20674 150 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 COL8A1P27658 744 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 CCR6P51684 374 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 BLOC1S1P78537 153 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 CHRNEQ04844 493 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 TRMT5Q32P41 509 aaKnown RBP4.49□□□□□ -1.69
CCDC39-205ENST00000485055 RFTN2Q52LD8 501 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-205ENST00000485055 PDZD11Q5EBL8 140 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 DUX4L9Q6RFH8 374 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-205ENST00000485055 DPY19L2P2Q6ZN68 376 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 ZNF440Q8IYI8 595 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 GPR119Q8TDV5 335 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 TMEM56Q96MV1 263 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 SORT1Q99523 831 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 VAPAQ9P0L0 249 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 PPP4R1LQ9P1A2 415 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 DUX4Q9UBX2 424 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 FZR1Q9UM11 496 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 SLC35A3Q9Y2D2 325 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 ARL2BPQ9Y2Y0 163 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 ZNF337Q9Y3M9 751 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 TMEM56-RWDD3S4R434 201 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 ICE1Q9Y2F5 2266 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 TRAV8-7A0A075B6U6 113 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 A6NIZ1 184 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 ZNF732B4DXR9 585 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 PLA2G1BP04054 148 aaKnown RBP4.48□□□□□ -1.69
CCDC39-205ENST00000485055 OR8U9P0C7N5 309 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 TAS2R41P59536 307 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 SUMO2P61956 95 aaKnown RBP4.48□□□□□ -1.69
CCDC39-205ENST00000485055 H3F3AP84243 136 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 P2RY6Q15077 328 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 ATP6AP1Q15904 470 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 AWAT1Q58HT5 328 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 ZNF585AQ6P3V2 769 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 SLC16A11Q8NCK7 471 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 MRPL48Q96GC5 212 aaKnown RBP4.48□□□□□ -1.69
CCDC39-205ENST00000485055 GNRHR2Q96P88 292 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 KCNA7Q96RP8 456 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 YTHDF1Q9BYJ9 559 aaKnown RBP4.48□□□□□ -1.69
CCDC39-205ENST00000485055 NPFFR1Q9GZQ6 430 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 SPAG4Q9NPE6 437 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 RCC2Q9P258 522 aaKnown RBP4.48□□□□□ -1.69
CCDC39-205ENST00000485055 FBXL2Q9UKC9 423 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 SPIN1Q9Y657 262 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-205ENST00000485055 ALG5Q9Y673 324 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 FREM3P0C091 2139 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 A0A1W2PRD5 423 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 A0A1W2PRF3 423 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 A0A1W2PRM7 423 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 OR2M5A3KFT3 312 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 F8W735 103 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-205ENST00000485055 TRIAP1O43715 76 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 GCM2O75603 506 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-205ENST00000485055 PPBPP02775 128 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 F13BP05160 661 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 WNT2P09544 360 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 ABCE1P61221 599 aaKnown RBP4.48□□□□□ -1.69
CCDC39-205ENST00000485055 RPL32P62910 135 aaKnown RBP4.48□□□□□ -1.69
CCDC39-205ENST00000485055 KPNB1Q14974 876 aaKnown RBP4.48□□□□□ -1.69
CCDC39-205ENST00000485055 ANXA2RQ3ZCQ2 193 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 APOOLQ6UXV4 268 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 OR2W3Q7Z3T1 314 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 CDC20BQ86Y33 519 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 SLC35F2Q8IXU6 374 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 CENPSQ8N2Z9 138 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 OR5W2Q8NH69 310 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 OR2V2Q96R30 315 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 ACTR3CQ9C0K3 210 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-205ENST00000485055 GALNT9Q9HCQ5 603 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 BCL2L10Q9HD36 194 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 MIEF1Q9NQG6 463 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 AIG1Q9NVV5 245 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 SETXQ7Z333 2677 aaKnown RBP4.48□□□□□ -1.69
CCDC39-205ENST00000485055 PCNX3Q9H6A9 2034 aa4.48□□□□□ -1.69
CCDC39-205ENST00000485055 A0A096LPI6 279 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 NKX2-6A6NCS4 301 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 SIRPB1O00241 398 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 MGRN1O60291 552 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms