RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 SYNGR1O43759 233 aa14.29□□□□□ -0.12
CTSA-207ENST00000484855 PDCD6O75340 191 aa14.29□□□□□ -0.12
CTSA-207ENST00000484855 OR7C1O76099 320 aaPredicted RBP14.29□□□□□ -0.12
CTSA-207ENST00000484855 ANXA3P12429 323 aa14.29□□□□□ -0.12
CTSA-207ENST00000484855 CXCL3P19876 107 aa14.29□□□□□ -0.12
CTSA-207ENST00000484855 FGF12P61328 243 aa14.29□□□□□ -0.12
CTSA-207ENST00000484855 PDCD1Q15116 288 aa14.29□□□□□ -0.12
CTSA-207ENST00000484855 ALKBH6Q3KRA9 238 aa14.29□□□□□ -0.12
CTSA-207ENST00000484855 TMED4Q7Z7H5 227 aa14.29□□□□□ -0.12
CTSA-207ENST00000484855 NOXA1Q86UR1 476 aa14.29□□□□□ -0.12
CTSA-207ENST00000484855 OR52B4Q8NGK2 314 aa14.29□□□□□ -0.12
CTSA-207ENST00000484855 CCDC107Q8WV48 283 aa14.29□□□□□ -0.12
CTSA-207ENST00000484855 POM121Q96HA1 1249 aa14.29□□□□□ -0.12
CTSA-207ENST00000484855 CMSS1Q9BQ75 279 aaKnown RBP14.29□□□□□ -0.12
CTSA-207ENST00000484855 PIGMQ9H3S5 423 aa14.29□□□□□ -0.12
CTSA-207ENST00000484855 RP1L1Q8IWN7 2480 aaPredicted RBP14.28□□□□□ -0.12
CTSA-207ENST00000484855 A0A0G2JNJ9 132 aa14.28□□□□□ -0.12
CTSA-207ENST00000484855 UBE2QL1A1L167 161 aa14.28□□□□□ -0.12
CTSA-207ENST00000484855 TUBG1P23258 451 aa14.28□□□□□ -0.12
CTSA-207ENST00000484855 CALCRP30988 508 aa14.28□□□□□ -0.12
CTSA-207ENST00000484855 TAS2R46P59540 309 aa14.28□□□□□ -0.12
CTSA-207ENST00000484855 RBPJQ06330 500 aa14.28□□□□□ -0.12
CTSA-207ENST00000484855 KCNJ8Q15842 424 aa14.28□□□□□ -0.12
CTSA-207ENST00000484855 ATPAF1Q5TC12 328 aaPredicted RBP14.28□□□□□ -0.12
CTSA-207ENST00000484855 PKIBQ9C010 78 aa14.28□□□□□ -0.12
CTSA-207ENST00000484855 CHST6Q9GZX3 395 aa14.28□□□□□ -0.12
CTSA-207ENST00000484855 TUBG2Q9NRH3 451 aa14.28□□□□□ -0.12
CTSA-207ENST00000484855 Q9UFV3 132 aa14.28□□□□□ -0.12
CTSA-207ENST00000484855 FAM90A10PA6NDY2 464 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 FAM90A18PA6NE21 464 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 FAM90A16PA6NEW6 464 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 FAM90A20PA6NIJ5 464 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 FAM90A8PA6NJQ4 464 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 FAM90A7PA6NKC0 464 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 FAM90A22PA8MWA6 464 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 FAM90A12PA8MX19 464 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 A8MXE2 369 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 FAM90A5PA8MXJ8 464 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 FAM90A23PA8MXZ1 464 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 F8VVB4 439 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 F8VWA3 439 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 FAM90A15PP0C7V4 464 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 FAM90A13PP0C7W8 464 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 FAM90A14PP0C7W9 464 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 FAM90A24PP0C7X0 464 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 ZNF83P51522 516 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 IL24Q13007 206 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 C4orf46Q504U0 113 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 ALKBH2Q6NS38 261 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 ARRDC1Q8N5I2 433 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 CAPSLQ8WWF8 208 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 MUCL1Q96DR8 90 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 ALX4Q9H161 411 aaPredicted RBP14.27□□□□□ -0.12
CTSA-207ENST00000484855 OR51I2Q9H344 312 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 VSIG4Q9Y279 399 aa14.27□□□□□ -0.12
CTSA-207ENST00000484855 SMLR1H3BR10 107 aa14.27□□□□□ -0.13
CTSA-207ENST00000484855 C1QBP02746 253 aa14.27□□□□□ -0.13
CTSA-207ENST00000484855 FUT3P21217 361 aa14.27□□□□□ -0.13
CTSA-207ENST00000484855 OR3A3P47888 321 aa14.27□□□□□ -0.13
CTSA-207ENST00000484855 NAAAQ02083 359 aa14.27□□□□□ -0.13
CTSA-207ENST00000484855 IGFBP7Q16270 282 aa14.27□□□□□ -0.13
CTSA-207ENST00000484855 CHRFAM7AQ494W8 412 aa14.27□□□□□ -0.13
CTSA-207ENST00000484855 NHLRC3Q5JS37 347 aa14.27□□□□□ -0.13
CTSA-207ENST00000484855 BRICD5Q6PL45 260 aa14.27□□□□□ -0.13
CTSA-207ENST00000484855 ZDHHC22Q8N966 263 aa14.27□□□□□ -0.13
CTSA-207ENST00000484855 DYRK2Q92630 601 aa14.27□□□□□ -0.13
CTSA-207ENST00000484855 MRGPRFQ96AM1 343 aa14.27□□□□□ -0.13
CTSA-207ENST00000484855 PURGQ9UJV8 347 aaKnown RBP14.27□□□□□ -0.13
CTSA-207ENST00000484855 MEIKINA0A087WXM9 373 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 LRP5LA4QPB2 252 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 OR2AT4A6NND4 320 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 J3QT63 122 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 M0R1B8 84 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 DTYMKP23919 212 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 TSPAN5P62079 268 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 DAZAP2Q15038 168 aaPredicted RBP14.26□□□□□ -0.13
CTSA-207ENST00000484855 OR8G1Q15617 311 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 MRGPRGQ86SM5 289 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 OR5AP2Q8NGF4 316 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 ZNF486Q96H40 463 aaPredicted RBP14.26□□□□□ -0.13
CTSA-207ENST00000484855 ZNF442Q9H7R0 627 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 C1QTNF9BB2RNN3 333 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 OR4E1P0C645 316 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 C1QTNF9P0C862 333 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 PRKACAP17612 351 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 GCH1P30793 250 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 ZNF718Q3SXZ3 478 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 C17orf107Q6ZR85 190 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 NCCRP1Q6ZVX7 275 aaPredicted RBP14.26□□□□□ -0.13
CTSA-207ENST00000484855 C1orf174Q8IYL3 243 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 ZNF488Q96MN9 340 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 HS3ST6Q96QI5 342 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 MYOZ1Q9NP98 299 aaPredicted RBP14.26□□□□□ -0.13
CTSA-207ENST00000484855 EHFQ9NZC4 300 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 MGAT4CQ9UBM8 478 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 EDARQ9UNE0 448 aa14.26□□□□□ -0.13
CTSA-207ENST00000484855 PRSS44E7EML9 344 aa14.25□□□□□ -0.13
CTSA-207ENST00000484855 TIMM8AO60220 97 aaPredicted RBP14.25□□□□□ -0.13
CTSA-207ENST00000484855 FCGR3AP08637 254 aa14.25□□□□□ -0.13
CTSA-207ENST00000484855 ARPC4P59998 168 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms