RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 NUDT15Q9NV35 164 aa5.94□□□□□ -1.46
BRCA1-216ENST00000484087 ING3Q9NXR8 418 aa5.94□□□□□ -1.46
BRCA1-216ENST00000484087 MRPL15Q9P015 296 aaKnown RBP5.94□□□□□ -1.46
BRCA1-216ENST00000484087 MYEF2Q9P2K5 600 aaKnown RBP5.94□□□□□ -1.46
BRCA1-216ENST00000484087 EIF3KQ9UBQ5 218 aaKnown RBP5.94□□□□□ -1.46
BRCA1-216ENST00000484087 KLK11Q9UBX7 282 aa5.94□□□□□ -1.46
BRCA1-216ENST00000484087 NF1P21359 2839 aa5.94□□□□□ -1.46
BRCA1-216ENST00000484087 CUBNO60494 3623 aa5.94□□□□□ -1.46
BRCA1-216ENST00000484087 SVEP1Q4LDE5 3571 aa5.94□□□□□ -1.46
BRCA1-216ENST00000484087 CR1P17927 2039 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 MTORP42345 2549 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 IGHV1-18A0A0C4DH31 117 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 IGKV1-9A0A0C4DH69 117 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 FAM230AA0A1W2PPH8 454 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 E7EQL1 145 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 J3QW42 95 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 HS3ST1O14792 307 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 SMAD7O15105 426 aaKnown RBP5.93□□□□□ -1.46
BRCA1-216ENST00000484087 GMDSO60547 372 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 CDC14BO60729 498 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 PRAF2O60831 178 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 LY6HO94772 140 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 GSTP1P09211 210 aaKnown RBP5.93□□□□□ -1.46
BRCA1-216ENST00000484087 PPP3CBP16298 524 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 CPT2P23786 658 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 CCR6P51684 374 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 GNG2P59768 71 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 QRFPP83859 136 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 FAM3AP98173 230 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 ZNF92Q03936 586 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 TNP2Q05952 138 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 RBMS2Q15434 407 aaKnown RBP5.93□□□□□ -1.46
BRCA1-216ENST00000484087 OR8B8Q15620 311 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 CDNFQ49AH0 187 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 SLC22A6Q4U2R8 563 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 TIMM23BQ5SRD1 257 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 LCE3BQ5TA77 95 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 PLCXD3Q63HM9 321 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 SFRP4Q6FHJ7 346 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-216ENST00000484087 STEAP1BQ6NZ63 245 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 COLCA1Q6ZS62 124 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 MOB3CQ70IA8 216 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 GLCCI1Q86VQ1 547 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 PAQR4Q8N4S7 273 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-216ENST00000484087 TMEM229BQ8NBD8 167 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 MAPK1IP1LQ8NDC0 245 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 C1orf162Q8NEQ5 155 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-216ENST00000484087 OR51T1Q8NGJ9 327 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 GPX8Q8TED1 209 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 PIGCQ92535 297 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 BCL2L2Q92843 193 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-216ENST00000484087 NINJ1Q92982 152 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 PIGTQ969N2 578 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 SPSB4Q96A44 273 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 RAB3CQ96E17 227 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 RADILQ96JH8 1075 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 FOXC2Q99958 501 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 C20orf85Q9H1P6 137 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 MED28Q9H204 178 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 CXXC4Q9H2H0 198 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 ZNF224Q9NZL3 707 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 SCP2D1Q9UJQ7 156 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 RHBDD3Q9Y3P4 386 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 ALG5Q9Y673 324 aa5.93□□□□□ -1.46
BRCA1-216ENST00000484087 LOC100509620A0A075B734 347 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 C5orf63A6NC05 138 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 TMEM235A6NFC5 223 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 ANKRD30BLA7E2S9 258 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 ZNF736B4DX44 427 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-216ENST00000484087 DISC1C4P0D8 188 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 RAB27BO00194 218 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 SMPD2O60906 423 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 PEX14O75381 377 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 RAB3DO95716 219 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 MELTFP08582 738 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 DANCRP0C864 163 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 NAT2P11245 290 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 PTHLHP12272 177 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 MGMTP16455 207 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 SERPINA2P20848 420 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 ACKR3P25106 362 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 CD40P25942 277 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 CALCRP30988 508 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 BTCP35070 178 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 CBX5P45973 191 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 RRAS2P62070 204 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-216ENST00000484087 NKX6-1P78426 367 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-216ENST00000484087 HGFACQ04756 655 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 UNC119Q13432 240 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 MEF2DQ14814 521 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 RSU1Q15404 277 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 PNLIPRP3Q17RR3 467 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 ZNF260Q3ZCT1 412 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 ZNF672Q499Z4 452 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-216ENST00000484087 ZFP69Q49AA0 526 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 TMEM42Q69YG0 159 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 VHLLQ6RSH7 139 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 SLC22A25Q6T423 547 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 SPNS3Q6ZMD2 512 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 TRAPPC6BQ86SZ2 158 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms