RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 F8VWA3 439 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 TRAPPC2LH3BP13 241 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 PYCARD-AS1I3L0S3 204 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 J3QT63 122 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 TPD52L2O43399 206 aaKnown RBP11.97□□□□□ -0.49
CLK3-204ENST00000483723 PDCD6O75340 191 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 AMY2AP04746 511 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 ACAA1P09110 424 aaPredicted RBP11.97□□□□□ -0.49
CLK3-204ENST00000483723 SFTPCP11686 197 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 CCKARP32238 428 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 NKX6-1P78426 367 aaPredicted RBP11.97□□□□□ -0.49
CLK3-204ENST00000483723 ESPL1Q14674 2120 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 ACTBL2Q562R1 376 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 HAGHLQ6PII5 290 aaPredicted RBP11.97□□□□□ -0.49
CLK3-204ENST00000483723 GLDNQ6ZMI3 551 aaPredicted RBP11.97□□□□□ -0.49
CLK3-204ENST00000483723 OR4K15Q8NH41 348 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 RND1Q92730 232 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 GINS4Q9BRT9 223 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 FAAP24Q9BTP7 215 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 MYOZ1Q9NP98 299 aaPredicted RBP11.97□□□□□ -0.49
CLK3-204ENST00000483723 TMEM100Q9NV29 134 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 ZNF581Q9P0T4 197 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 SCP2D1Q9UJQ7 156 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 POU2F3Q9UKI9 436 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 PLEKHA6Q9Y2H5 1048 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 MEMO1Q9Y316 297 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 HEATR1Q9H583 2144 aaKnown RBP11.97□□□□□ -0.49
CLK3-204ENST00000483723 USP24Q9UPU5 2620 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 TMEM210A6NLX4 147 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 C16orf97H3BN30 126 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 M0R1B8 84 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 FUT3P21217 361 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 GLRXP35754 106 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 MPV17LQ2QL34 196 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 METTL11BQ5VVY1 283 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 CD276Q5ZPR3 534 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 SSX8Q7RTT4 187 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 DRAXINQ8NBI3 349 aaPredicted RBP11.97□□□□□ -0.49
CLK3-204ENST00000483723 OR13C8Q8NGS7 320 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 HS3ST6Q96QI5 342 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 PRRT1Q99946 306 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 SULT4A1Q9BR01 284 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 PLK3Q9H4B4 646 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 MLNRO43193 412 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 CRYAAP02489 173 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 HPXP02790 462 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 ZNF250P15622 560 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 DTYMKP23919 212 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 HRH1P35367 487 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 CA7P43166 264 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 ERVK11-1P61568 191 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 MICBQ29980 383 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 NKAPLQ5M9Q1 402 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 ATAD3CQ5T2N8 411 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 IDO2Q6ZQW0 420 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 LINC00596Q86U02 117 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 ADAT1Q9BUB4 502 aaKnown RBP11.96□□□□□ -0.49
CLK3-204ENST00000483723 CHST6Q9GZX3 395 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 RCC2Q9P258 522 aaKnown RBP11.96□□□□□ -0.49
CLK3-204ENST00000483723 AK3Q9UIJ7 227 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 SH3BGRL2Q9UJC5 107 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 ZNF221Q9UK13 617 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 EDARQ9UNE0 448 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 SPEF1Q9Y4P9 236 aa11.96□□□□□ -0.49
CLK3-204ENST00000483723 SNRPGP15A8MWD9 76 aa11.95□□□□□ -0.5
CLK3-204ENST00000483723 H0YL77 283 aa11.95□□□□□ -0.5
CLK3-204ENST00000483723 H3BUI4 141 aa11.95□□□□□ -0.5
CLK3-204ENST00000483723 VSIG10L2P0DP72 767 aa11.95□□□□□ -0.5
CLK3-204ENST00000483723 GCH1P30793 250 aa11.95□□□□□ -0.5
CLK3-204ENST00000483723 FABP6P51161 128 aa11.95□□□□□ -0.5
CLK3-204ENST00000483723 IL13RA2Q14627 380 aa11.95□□□□□ -0.5
CLK3-204ENST00000483723 IGFBP7Q16270 282 aa11.95□□□□□ -0.5
CLK3-204ENST00000483723 MSMPQ1L6U9 139 aa11.95□□□□□ -0.5
CLK3-204ENST00000483723 RGS7BPQ6MZT1 257 aaPredicted RBP11.95□□□□□ -0.5
CLK3-204ENST00000483723 Q6ZR03 302 aa11.95□□□□□ -0.5
CLK3-204ENST00000483723 SPERTQ8NA61 448 aa11.95□□□□□ -0.5
CLK3-204ENST00000483723 SCCPDHQ8NBX0 429 aa11.95□□□□□ -0.5
CLK3-204ENST00000483723 BEST4Q8NFU0 473 aa11.95□□□□□ -0.5
CLK3-204ENST00000483723 MRGPRFQ96AM1 343 aa11.95□□□□□ -0.5
CLK3-204ENST00000483723 RADILQ96JH8 1075 aa11.95□□□□□ -0.5
CLK3-204ENST00000483723 MED28Q9H204 178 aa11.95□□□□□ -0.5
CLK3-204ENST00000483723 SHANK1Q9Y566 2161 aa11.95□□□□□ -0.5
CLK3-204ENST00000483723 CEACAM18A8MTB9 384 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 NOS1APO75052 506 aaPredicted RBP11.94□□□□□ -0.5
CLK3-204ENST00000483723 RHBDL1O75783 438 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 IGHV3-13P01766 116 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 PMP2P02689 132 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 ANXA7P20073 488 aaKnown RBP11.94□□□□□ -0.5
CLK3-204ENST00000483723 EIF2B2P49770 351 aaKnown RBP11.94□□□□□ -0.5
CLK3-204ENST00000483723 SNU13P55769 128 aaKnown RBP11.94□□□□□ -0.5
CLK3-204ENST00000483723 FCN2Q15485 313 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 OR8G1Q15617 311 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 NKPD1Q17RQ9 610 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 TCTE3Q8IZS6 198 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 ARRDC1Q8N5I2 433 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 CMSS1Q9BQ75 279 aaKnown RBP11.94□□□□□ -0.5
CLK3-204ENST00000483723 ST6GALNAC5Q9BVH7 336 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 BEX2Q9BXY8 128 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 TLNRD1Q9H1K6 362 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 CXXC4Q9H2H0 198 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms