RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 HMGN1P05114 100 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 ZNF728P0DKX0 622 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 IGHV1-8P0DP01 117 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 CALCBP10092 127 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 CD33P20138 364 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 ROM1Q03395 351 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 SLC34A1Q06495 639 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 SNAPC1Q16533 368 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 ZNF626Q68DY1 528 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 TMEM42Q69YG0 159 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 BAIAP2L2Q6UXY1 529 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 ZNF573Q86YE8 665 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 ZNF679Q8IYX0 411 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 OR13D1Q8NGV5 346 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 CNN2Q99439 309 aaKnown RBP11.17□□□□□ -0.62
VARS-226ENST00000483275 CHST6Q9GZX3 395 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 SLC25A19Q9HC21 320 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 POLDIP2Q9Y2S7 368 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 TBL2Q9Y4P3 447 aaKnown RBP11.17□□□□□ -0.62
VARS-226ENST00000483275 IGKV1-27A0A075B6S5 117 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 TMEM82A0PJX8 343 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 FAM172BPA6NC97 362 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 ACOD1A6NK06 481 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 K7EIL1 84 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 NOS1APO75052 506 aaPredicted RBP11.16□□□□□ -0.62
VARS-226ENST00000483275 IGHA1P01876 353 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 ANXA8P13928 327 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 ATP6V1B1P15313 513 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 MPZP25189 248 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 SNU13P55769 128 aaKnown RBP11.16□□□□□ -0.62
VARS-226ENST00000483275 CXCR4P61073 352 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 ERVK11-1P61568 191 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 ACTA2P62736 377 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 ACTG2P63267 376 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 ACTC1P68032 377 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 ACTA1P68133 377 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 EMX1Q04741 257 aaPredicted RBP11.16□□□□□ -0.62
VARS-226ENST00000483275 TCTEX1D4Q5JR98 221 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 DEGS2Q6QHC5 323 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 ZNF322Q6U7Q0 402 aaPredicted RBP11.16□□□□□ -0.62
VARS-226ENST00000483275 C10orf99Q6UWK7 81 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 GDPD3Q7L5L3 318 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 OR14K1Q8NGZ2 314 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 NDNFQ8TB73 568 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 TEX12Q9BXU0 123 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 OR52A1Q9UKL2 312 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 AP4S1Q9Y587 144 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 V9GYS6 101 aa11.16□□□□□ -0.62
VARS-226ENST00000483275 MMP23AO75900 390 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 RPP14O95059 124 aaKnown RBP11.15□□□□□ -0.62
VARS-226ENST00000483275 APOL3O95236 402 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 PF4V1P10720 104 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 FCGR1AP12314 374 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 FASP25445 335 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 DUSP1P28562 367 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 OR12D2P58182 307 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 LCN1P1Q5VSP4 162 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 SSX6Q7RTT6 188 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 SLC35F2Q8IXU6 374 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 ELMOD2Q8IZ81 293 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 ZNF676Q8N7Q3 588 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 OR5AU1Q8NGC0 362 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 OR11H6Q8NGC7 330 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 MALSU1Q96EH3 234 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 ZNF714Q96N38 554 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 TBX5Q99593 518 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 MTCH1Q9NZJ7 389 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 MRM2Q9UI43 246 aaKnown RBP11.15□□□□□ -0.62
VARS-226ENST00000483275 PITPNC1Q9UKF7 332 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 R4GMQ9 66 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 DNAH9Q9NYC9 4486 aa11.15□□□□□ -0.62
VARS-226ENST00000483275 IGHV2-26A0A0B4J1V2 119 aa11.14□□□□□ -0.63
VARS-226ENST00000483275 WI2-2373I1.2A0A1W2PRP0 233 aa11.14□□□□□ -0.63
VARS-226ENST00000483275 DLGAP1O14490 977 aa11.14□□□□□ -0.63
VARS-226ENST00000483275 ZNF254O75437 659 aa11.14□□□□□ -0.63
VARS-226ENST00000483275 KRTAP10-11P60412 298 aa11.14□□□□□ -0.63
VARS-226ENST00000483275 IL24Q13007 206 aa11.14□□□□□ -0.63
VARS-226ENST00000483275 KHDC1LQ5JSQ8 128 aa11.14□□□□□ -0.63
VARS-226ENST00000483275 PRAMEF5Q5TYX0 476 aa11.14□□□□□ -0.63
VARS-226ENST00000483275 SLC25A26Q70HW3 274 aa11.14□□□□□ -0.63
VARS-226ENST00000483275 OR8H2Q8N162 312 aa11.14□□□□□ -0.63
VARS-226ENST00000483275 OR52N4Q8NGI2 321 aa11.14□□□□□ -0.63
VARS-226ENST00000483275 ASB17Q8WXJ9 295 aa11.14□□□□□ -0.63
VARS-226ENST00000483275 DNAJC9Q8WXX5 260 aa11.14□□□□□ -0.63
VARS-226ENST00000483275 NRBF2Q96F24 287 aa11.14□□□□□ -0.63
VARS-226ENST00000483275 CEP19Q96LK0 163 aa11.14□□□□□ -0.63
VARS-226ENST00000483275 OCSTAMPQ9BR26 566 aa11.14□□□□□ -0.63
VARS-226ENST00000483275 ADGRL4Q9HBW9 690 aa11.14□□□□□ -0.63
VARS-226ENST00000483275 MITFO75030 526 aaPredicted RBP11.13□□□□□ -0.63
VARS-226ENST00000483275 GABRR1P24046 479 aa11.13□□□□□ -0.63
VARS-226ENST00000483275 EPHA2P29317 976 aa11.13□□□□□ -0.63
VARS-226ENST00000483275 HOXD3P31249 432 aaPredicted RBP11.13□□□□□ -0.63
VARS-226ENST00000483275 CRISP1P54107 249 aa11.13□□□□□ -0.63
VARS-226ENST00000483275 CD83Q01151 205 aa11.13□□□□□ -0.63
VARS-226ENST00000483275 UBE2V2Q15819 145 aa11.13□□□□□ -0.63
VARS-226ENST00000483275 ATP6AP1Q15904 470 aa11.13□□□□□ -0.63
VARS-226ENST00000483275 C10orf67Q8IYJ2 551 aa11.13□□□□□ -0.63
VARS-226ENST00000483275 EMG1Q92979 244 aaKnown RBP11.13□□□□□ -0.63
VARS-226ENST00000483275 MYDGFQ969H8 173 aa11.13□□□□□ -0.63
VARS-226ENST00000483275 PKIBQ9C010 78 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms