RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 ST8SIA3O43173 380 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 DLEU1O43261 78 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 TGOLN2O43493 480 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 GCGP01275 180 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 IGHMP01871 453 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 POU2F2P09086 479 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 HNRNPA1P09651 372 aaKnown RBP eCLIP10.33□□□□□ -0.76
VTI1A-205ENST00000483122 NOVA1P51513 510 aaKnown RBP10.33□□□□□ -0.76
VTI1A-205ENST00000483122 H3F3AP84243 136 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 ZFP36L1Q07352 338 aaKnown RBP10.33□□□□□ -0.76
VTI1A-205ENST00000483122 P2RY6Q15077 328 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 OGFOD3Q6PK18 319 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 CPEB2Q7Z5Q1 589 aaKnown RBP10.33□□□□□ -0.76
VTI1A-205ENST00000483122 TMEM123Q8N131 208 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 FBXL14Q8N1E6 418 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 FAM89BQ8N5H3 189 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 SLC35G3Q8N808 338 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 TMEM171Q8WVE6 324 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 FAM71F1Q96KD3 344 aaPredicted RBP10.33□□□□□ -0.76
VTI1A-205ENST00000483122 NAA60Q9H7X0 242 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 THAP10Q9P2Z0 257 aaPredicted RBP10.33□□□□□ -0.76
VTI1A-205ENST00000483122 DKKL1Q9UK85 242 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 SLC7A11Q9UPY5 501 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 ATG2BQ96BY7 2078 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 MYO9BQ13459 2157 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 TRBV24-1A0A075B6N3 115 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 A0A1B0GU03 582 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 IL33O95760 270 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 CYB5R3P00387 301 aaPredicted RBP10.32□□□□□ -0.76
VTI1A-205ENST00000483122 MT-ATP6P00846 226 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 MMP9P14780 707 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 DUSP1P28562 367 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 SLC37A1P57057 533 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 FAM90A2PQ658T7 463 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 ABHD12BQ7Z5M8 362 aaPredicted RBP10.32□□□□□ -0.76
VTI1A-205ENST00000483122 THNSL2Q86YJ6 484 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 SFTPA2Q8IWL1 248 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 DEFB123Q8N688 67 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 OR14L1PQ8NHC6 308 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 NPRL2Q8WTW4 380 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 C11orf40Q8WZ69 217 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 C18orf12Q96KH6 178 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 HIST1H2AAQ96QV6 131 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 CDX2Q99626 313 aaPredicted RBP10.32□□□□□ -0.76
VTI1A-205ENST00000483122 CABLES2Q9BTV7 478 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 IGFLR1Q9H665 355 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 ZNF319Q9P2F9 582 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 IGKV1-9A0A0C4DH69 117 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 FAM230AA0A1W2PPH8 454 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 XKRY2A2RUG3 117 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 B4DEV8 164 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 H0YIG0 161 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 CD55P08174 381 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 SFTPDP35247 375 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 RAB11AP62491 216 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 RUNX1Q01196 453 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 TAF9Q16594 264 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 PHLDA2Q53GA4 152 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 C6orf201Q7Z4U5 140 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 PRR18Q8N4B5 295 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 GPR119Q8TDV5 335 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 DNASE2BQ8WZ79 361 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 GAB2Q9UQC2 676 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 B3GALT1Q9Y5Z6 326 aa10.32□□□□□ -0.76
VTI1A-205ENST00000483122 TMED7-TICAM2A0A0A6YYA0 188 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 ONECUT2O95948 504 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 TMEM225BP0DP42 221 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 ZNF17P17021 662 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 EPHA1P21709 976 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 IGLV3-21P80748 117 aaPredicted RBP10.31□□□□□ -0.76
VTI1A-205ENST00000483122 PAX5Q02548 391 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 WDR25Q64LD2 544 aaPredicted RBP10.31□□□□□ -0.76
VTI1A-205ENST00000483122 OR2C3Q8N628 320 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 METTL27Q8N6F8 245 aaPredicted RBP10.31□□□□□ -0.76
VTI1A-205ENST00000483122 OR10A7Q8NGE5 316 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 OR5L1Q8NGL2 311 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 OR2AJ1Q8NGZ0 328 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 OR14C36Q8NHC7 312 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 RTN4IP1Q8WWV3 396 aaPredicted RBP10.31□□□□□ -0.76
VTI1A-205ENST00000483122 ASB10Q8WXI3 467 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 GUCD1Q96NT3 240 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 OPN3Q9H1Y3 402 aaPredicted RBP10.31□□□□□ -0.76
VTI1A-205ENST00000483122 GPR84Q9NQS5 396 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 MED29Q9NX70 200 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 NXT1Q9UKK6 140 aaKnown RBP10.31□□□□□ -0.76
VTI1A-205ENST00000483122 LOC102723971A0A1B0GUV8 181 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 CDC14CA4D256 554 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 NPIPB7O75200 414 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 KLF8O95600 359 aaPredicted RBP10.31□□□□□ -0.76
VTI1A-205ENST00000483122 TK1P04183 234 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 GP1BBP13224 206 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 FOLR1P15328 257 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 FOSL2P15408 326 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 ZNF43P17038 809 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 GABRR1P24046 479 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 ECI1P42126 302 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 ALDH3B1P43353 468 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 FXYD4P59646 89 aa10.31□□□□□ -0.76
VTI1A-205ENST00000483122 RPS21P63220 83 aaKnown RBP10.31□□□□□ -0.76
VTI1A-205ENST00000483122 HSF1Q00613 529 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms