RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 BMXP51813 675 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 DSCR9P59020 149 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 DGUOKQ16854 277 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 MICBQ29980 383 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 SMIM21Q3B7S5 101 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 C2orf76Q3KRA6 126 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 AVPI1Q5T686 147 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 ELP2Q6IA86 826 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 OR10K2Q6IF99 312 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 DYNC2LI1Q8TCX1 351 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 FAM168AQ92567 244 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 C1orf147Q96MC9 270 aaPredicted RBP10.27□□□□□ -0.77
SDC1-206ENST00000482879 BARHL1Q9BZE3 327 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 KCNK15Q9H427 330 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 BANF2Q9H503 90 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 LIN7BQ9HAP6 207 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 HES4Q9HCC6 221 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 HMG20AQ9NP66 347 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 WIPI2Q9Y4P8 454 aa10.27□□□□□ -0.77
SDC1-206ENST00000482879 TRAV38-1A0A0B4J264 116 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 A0A1W2PP11 408 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 ISPDA4D126 451 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 OOEPA6NGQ2 149 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 TMEM127O75204 238 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 CRTAPO75718 401 aaPredicted RBP10.26□□□□□ -0.77
SDC1-206ENST00000482879 VSIG8P0DPA2 414 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 GTF2F2P13984 249 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 SNRPBP14678 240 aaKnown RBP10.26□□□□□ -0.77
SDC1-206ENST00000482879 MUC1P15941 1255 aaPredicted RBP10.26□□□□□ -0.77
SDC1-206ENST00000482879 ZNF182P17025 639 aaPredicted RBP10.26□□□□□ -0.77
SDC1-206ENST00000482879 GIFP27352 417 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 SOX6P35712 828 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 CAPZA1P52907 286 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 SNU13P55769 128 aaKnown RBP10.26□□□□□ -0.77
SDC1-206ENST00000482879 FGF12P61328 243 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 BTG1P62324 171 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 QRFPP83859 136 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 ZMYND11Q15326 602 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 CLEC12BQ2HXU8 276 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 TEX36Q5VZQ5 186 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 FIP1L1Q6UN15 594 aaKnown RBP10.26□□□□□ -0.77
SDC1-206ENST00000482879 FAM90A1Q86YD7 464 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 OSR2Q8N2R0 312 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 Q8NFD4 153 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 OR5T2Q8NGG2 359 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 KCNG3Q8TAE7 436 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 C10orf105Q8TEF2 133 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 FAM46BQ96A09 425 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 PIMREGQ9BSJ6 248 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 CST11Q9H112 138 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 TMEM165Q9HC07 324 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 NLKQ9UBE8 527 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 OR5V1Q9UGF6 321 aa10.26□□□□□ -0.77
SDC1-206ENST00000482879 PDZD2O15018 2839 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 TMEM272A0A1B0GTI8 110 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 RFPL4AA6NLU0 287 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 TMEM14DPA8MWL7 114 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 RFPL4AL1F8VTS6 287 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 NDUFS8O00217 210 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 MPIG6BO95866 241 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 PAHP00439 452 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 KNG1P01042 644 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 IGHV2-70P01814 119 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 GYPAP02724 150 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 PSG2P11465 335 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 MGMTP16455 207 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 MDH2P40926 338 aaKnown RBP10.25□□□□□ -0.77
SDC1-206ENST00000482879 KCNJ8Q15842 424 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 Q5PR19 223 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 PRSS57Q6UWY2 283 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 OR2W3Q7Z3T1 314 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 LRRC28Q86X40 367 aaPredicted RBP10.25□□□□□ -0.77
SDC1-206ENST00000482879 TMEM104Q8NE00 496 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 KCTD12Q96CX2 325 aaKnown RBP10.25□□□□□ -0.77
SDC1-206ENST00000482879 MRPS24Q96EL2 167 aaKnown RBP10.25□□□□□ -0.77
SDC1-206ENST00000482879 FOXC2Q99958 501 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 DCUN1D5Q9BTE7 237 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 MRI1Q9BV20 369 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 SELENOIQ9C0D9 397 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 BPESC1Q9GZL8 116 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 CCDC59Q9P031 241 aaKnown RBP10.25□□□□□ -0.77
SDC1-206ENST00000482879 ABRACLQ9P1F3 81 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 IL36RNQ9UBH0 155 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 OR14J1Q9UGF5 321 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 RAB22AQ9UL26 194 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 ST3GAL6Q9Y274 331 aa10.25□□□□□ -0.77
SDC1-206ENST00000482879 IGHV4-30-2A0A087WSY4 118 aa10.24□□□□□ -0.77
SDC1-206ENST00000482879 OR2AT4A6NND4 320 aa10.24□□□□□ -0.77
SDC1-206ENST00000482879 LDLRAD4O15165 306 aa10.24□□□□□ -0.77
SDC1-206ENST00000482879 FSTL3O95633 263 aa10.24□□□□□ -0.77
SDC1-206ENST00000482879 DUSP1P28562 367 aa10.24□□□□□ -0.77
SDC1-206ENST00000482879 PRDX2P32119 198 aa10.24□□□□□ -0.77
SDC1-206ENST00000482879 GABRA2P47869 451 aa10.24□□□□□ -0.77
SDC1-206ENST00000482879 ART1P52961 327 aa10.24□□□□□ -0.77
SDC1-206ENST00000482879 UNC119Q13432 240 aa10.24□□□□□ -0.77
SDC1-206ENST00000482879 PIGYQ3MUY2 71 aa10.24□□□□□ -0.77
SDC1-206ENST00000482879 ZNF404Q494X3 552 aa10.24□□□□□ -0.77
SDC1-206ENST00000482879 SHEQ5VZ18 495 aa10.24□□□□□ -0.77
SDC1-206ENST00000482879 DNM1P46Q6ZS02 220 aa10.24□□□□□ -0.77
SDC1-206ENST00000482879 MUC20Q8N307 709 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms