RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 SMIM3Q9BZL3 60 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 DECR2Q9NUI1 292 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 FBXL17Q9UF56 701 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 AMDHD2Q9Y303 409 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 FAM230AA0A1W2PPH8 454 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 GFRA3O60609 400 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 DEDDO75618 318 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 FARS2O95363 451 aaKnown RBP12.92□□□□□ -0.34
ATG4B-220ENST00000482507 CTSDP07339 412 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-220ENST00000482507 OR5H8P0DN80 308 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 PVALBP20472 110 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-220ENST00000482507 BTNL8Q6UX41 500 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 SH2D2AQ9NP31 389 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 TUBD1Q9UJT1 453 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 EIF1BO60739 113 aaKnown RBP12.91□□□□□ -0.34
ATG4B-220ENST00000482507 KLF7O75840 302 aaPredicted RBP12.91□□□□□ -0.34
ATG4B-220ENST00000482507 FCGR3AP08637 254 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 NR2C1P13056 603 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 PRKACAP17612 351 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 FCGR2CP31995 323 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 SUCLG1P53597 346 aaKnown RBP12.91□□□□□ -0.34
ATG4B-220ENST00000482507 DSCR4P56555 118 aaPredicted RBP12.91□□□□□ -0.34
ATG4B-220ENST00000482507 ZNF774Q6NX45 483 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 FNDC9Q8TBE3 224 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 ERGIC1Q969X5 290 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 SULT4A1Q9BR01 284 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 PADI1Q9ULC6 663 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 PTRH2Q9Y3E5 179 aaKnown RBP12.91□□□□□ -0.34
ATG4B-220ENST00000482507 FAM221AA4D161 298 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 RNASEK-C17orf49H0YIS7 233 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 K7EPK0 472 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 SYNGR3O43761 229 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 MTRF1O75570 445 aaKnown RBP12.91□□□□□ -0.34
ATG4B-220ENST00000482507 TCN2P20062 427 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 SULT1A2P50226 295 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 TMEM33P57088 247 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 TSPO2Q5TGU0 170 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 FAM27BQ5VT28 67 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 SGPP2Q8IWX5 399 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 FAM71E2Q8N5Q1 922 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 NAXEQ8NCW5 288 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 WDR54Q9H977 334 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 DKKL1Q9UK85 242 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 MEMO1Q9Y316 297 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 LSM5Q9Y4Y9 91 aaKnown RBP12.91□□□□□ -0.34
ATG4B-220ENST00000482507 HS3ST3B1Q9Y662 390 aa12.91□□□□□ -0.34
ATG4B-220ENST00000482507 IGKV1-12A0A0C4DH73 117 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 A0A0G2JMM0 328 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 A0A1W2PPB8 328 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 A0A1W2PRS3 328 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 KIR3DP1A8MWS1 328 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 FAM157AC9JC47 383 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 TAAR5O14804 337 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 VAMP5O95183 116 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 SNAPINO95295 136 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 SLC34A2O95436 690 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 CST4P01036 141 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 IGKV1D-12P01611 117 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 SFTA3P0C7M3 94 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 CEACAM1P13688 526 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 MRPS34P82930 218 aaKnown RBP12.9□□□□□ -0.34
ATG4B-220ENST00000482507 PPA1Q15181 289 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 OPN5Q6U736 354 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 Q6ZPA2 131 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 SPAG16Q8N0X2 631 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 TOMM40LQ969M1 308 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 SPTSSAQ969W0 71 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 REEP6Q96HR9 211 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 PARP12Q9H0J9 701 aaKnown RBP12.9□□□□□ -0.34
ATG4B-220ENST00000482507 DLL3Q9NYJ7 618 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 AKAP13Q12802 2813 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 CD5P06127 495 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 OR8U9P0C7N5 309 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 GLI4P10075 376 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 PIGPP57054 158 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 PIGYQ3MUY2 71 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 PLXDC2Q6UX71 529 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 C6orf15Q6UXA7 325 aaPredicted RBP12.9□□□□□ -0.34
ATG4B-220ENST00000482507 OR8U1Q8NH10 309 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 AKR7LQ8NHP1 331 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 C10orf35Q96D05 121 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 ZNF700Q9H0M5 742 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 METTL9Q9H1A3 318 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 MLXQ9UH92 298 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 ZNF175Q9Y473 711 aa12.9□□□□□ -0.34
ATG4B-220ENST00000482507 FRYQ5TBA9 3013 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 MEX3AA1L020 520 aaKnown RBP12.89□□□□□ -0.35
ATG4B-220ENST00000482507 SGCEO43556 437 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 SCGB1D2O95969 90 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 CHATP28329 748 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 ARL6IP1Q15041 203 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 PDCD1Q15116 288 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 RSU1Q15404 277 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 TMEM164Q5U3C3 297 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 ETV3LQ6ZN32 361 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 NAA11Q9BSU3 229 aaPredicted RBP12.89□□□□□ -0.35
ATG4B-220ENST00000482507 SPRY4Q9C004 299 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 TERTO14746 1132 aaKnown RBP12.89□□□□□ -0.35
ATG4B-220ENST00000482507 GEMIN2O14893 280 aaKnown RBP12.89□□□□□ -0.35
ATG4B-220ENST00000482507 MBPP02686 304 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms