RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 CT45A5P0DMU8 189 aa2.56□□□□□ -2
SMC6-208ENST00000481708 CT45A7P0DMV0 189 aa2.56□□□□□ -2
SMC6-208ENST00000481708 THRAP10827 490 aa2.56□□□□□ -2
SMC6-208ENST00000481708 M6PRP20645 277 aa2.56□□□□□ -2
SMC6-208ENST00000481708 ME2P23368 584 aa2.56□□□□□ -2
SMC6-208ENST00000481708 FOXN2P32314 431 aa2.56□□□□□ -2
SMC6-208ENST00000481708 RAB14P61106 215 aa2.56□□□□□ -2
SMC6-208ENST00000481708 CCL7P80098 99 aa2.56□□□□□ -2
SMC6-208ENST00000481708 CD164Q04900 197 aa2.56□□□□□ -2
SMC6-208ENST00000481708 KRTAP1-1Q07627 177 aa2.56□□□□□ -2
SMC6-208ENST00000481708 BCL2L1Q07817 233 aa2.56□□□□□ -2
SMC6-208ENST00000481708 STX4Q12846 297 aa2.56□□□□□ -2
SMC6-208ENST00000481708 GAGE5Q13069 117 aa2.56□□□□□ -2
SMC6-208ENST00000481708 GAGE6Q13070 117 aa2.56□□□□□ -2
SMC6-208ENST00000481708 MED21Q13503 144 aa2.56□□□□□ -2
SMC6-208ENST00000481708 FBXL19-AS1Q494R0 122 aa2.56□□□□□ -2
SMC6-208ENST00000481708 CT45A1Q5HYN5 189 aa2.56□□□□□ -2
SMC6-208ENST00000481708 THOC7Q6I9Y2 204 aaKnown RBP2.56□□□□□ -2
SMC6-208ENST00000481708 RFLNBQ8N5W9 214 aa2.56□□□□□ -2
SMC6-208ENST00000481708 OR10W1Q8NGF6 305 aa2.56□□□□□ -2
SMC6-208ENST00000481708 CT45A3Q8NHU0 189 aa2.56□□□□□ -2
SMC6-208ENST00000481708 SECTM1Q8WVN6 248 aa2.56□□□□□ -2
SMC6-208ENST00000481708 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.56□□□□□ -2
SMC6-208ENST00000481708 TMEM234Q8WY98 164 aa2.56□□□□□ -2
SMC6-208ENST00000481708 ZNF385AQ96PM9 386 aaKnown RBP2.56□□□□□ -2
SMC6-208ENST00000481708 LGMNQ99538 433 aa2.56□□□□□ -2
SMC6-208ENST00000481708 DHX35Q9H5Z1 703 aaKnown RBP2.56□□□□□ -2
SMC6-208ENST00000481708 ELL3Q9HB65 397 aaPredicted RBP2.56□□□□□ -2
SMC6-208ENST00000481708 USE1Q9NZ43 259 aa2.56□□□□□ -2
SMC6-208ENST00000481708 SAMD4AQ9UPU9 718 aaKnown RBP2.56□□□□□ -2
SMC6-208ENST00000481708 ACACAQ13085 2346 aa2.56□□□□□ -2
SMC6-208ENST00000481708 A0A087X002 238 aa2.56□□□□□ -2
SMC6-208ENST00000481708 TMEM150BA6NC51 233 aa2.56□□□□□ -2
SMC6-208ENST00000481708 BTNL10A8MVZ5 291 aa2.56□□□□□ -2
SMC6-208ENST00000481708 ANKRD65E5RJM6 399 aa2.56□□□□□ -2
SMC6-208ENST00000481708 K7N7A8 449 aa2.56□□□□□ -2
SMC6-208ENST00000481708 SAP18O00422 153 aaKnown RBP2.56□□□□□ -2
SMC6-208ENST00000481708 ASS1P00966 412 aaKnown RBP2.56□□□□□ -2
SMC6-208ENST00000481708 CRYABP02511 175 aaKnown RBP2.56□□□□□ -2
SMC6-208ENST00000481708 RNF224P0DH78 156 aa2.56□□□□□ -2
SMC6-208ENST00000481708 ANOS1P23352 680 aa2.56□□□□□ -2
SMC6-208ENST00000481708 AQP1P29972 269 aa2.56□□□□□ -2
SMC6-208ENST00000481708 SSBP2P81877 361 aaPredicted RBP2.56□□□□□ -2
SMC6-208ENST00000481708 ZNF235Q14590 738 aa2.56□□□□□ -2
SMC6-208ENST00000481708 ZBED5Q49AG3 693 aa2.56□□□□□ -2
SMC6-208ENST00000481708 ACSM3Q53FZ2 586 aa2.56□□□□□ -2
SMC6-208ENST00000481708 CYB5R2Q6BCY4 276 aa2.56□□□□□ -2
SMC6-208ENST00000481708 FAM45BPQ6NSW5 357 aa2.56□□□□□ -2
SMC6-208ENST00000481708 SPICQ8N5J4 248 aa2.56□□□□□ -2
SMC6-208ENST00000481708 ZNF740Q8NDX6 193 aa2.56□□□□□ -2
SMC6-208ENST00000481708 OR10AD1Q8NGE0 317 aa2.56□□□□□ -2
SMC6-208ENST00000481708 OR6K6Q8NGW6 343 aa2.56□□□□□ -2
SMC6-208ENST00000481708 C16orf52Q8NHV5 167 aa2.56□□□□□ -2
SMC6-208ENST00000481708 SLC45A3Q96JT2 553 aa2.56□□□□□ -2
SMC6-208ENST00000481708 OR10C1Q96KK4 312 aa2.56□□□□□ -2
SMC6-208ENST00000481708 ZNF442Q9H7R0 627 aa2.56□□□□□ -2
SMC6-208ENST00000481708 GUCA1BQ9UMX6 200 aa2.56□□□□□ -2
SMC6-208ENST00000481708 FUOMA2VDF0 154 aa2.56□□□□□ -2
SMC6-208ENST00000481708 FAM166BA8MTA8 275 aa2.56□□□□□ -2
SMC6-208ENST00000481708 SNAP91O60641 907 aa2.56□□□□□ -2
SMC6-208ENST00000481708 CTNSO60931 367 aa2.56□□□□□ -2
SMC6-208ENST00000481708 ATP6V1G2O95670 118 aa2.56□□□□□ -2
SMC6-208ENST00000481708 REG1BP48304 166 aa2.56□□□□□ -2
SMC6-208ENST00000481708 PRPSAP1Q14558 356 aa2.56□□□□□ -2
SMC6-208ENST00000481708 TRAM1Q15629 374 aa2.56□□□□□ -2
SMC6-208ENST00000481708 GID4Q8IVV7 300 aa2.56□□□□□ -2
SMC6-208ENST00000481708 AQP11Q8NBQ7 271 aa2.56□□□□□ -2
SMC6-208ENST00000481708 C11orf72Q8NBR9 251 aa2.56□□□□□ -2
SMC6-208ENST00000481708 OR4C13Q8NGP0 309 aa2.56□□□□□ -2
SMC6-208ENST00000481708 FRAT1Q92837 279 aaPredicted RBP2.56□□□□□ -2
SMC6-208ENST00000481708 ZNF354BQ96LW1 612 aa2.56□□□□□ -2
SMC6-208ENST00000481708 TMEM109Q9BVC6 243 aa2.56□□□□□ -2
SMC6-208ENST00000481708 HOXD1Q9GZZ0 328 aa2.56□□□□□ -2
SMC6-208ENST00000481708 TAAR2Q9P1P5 351 aa2.56□□□□□ -2
SMC6-208ENST00000481708 ACOT9Q9Y305 439 aa2.56□□□□□ -2
SMC6-208ENST00000481708 CEP295Q9C0D2 2601 aa2.56□□□□□ -2
SMC6-208ENST00000481708 CRYBG3Q68DQ2 2970 aa2.55□□□□□ -2
SMC6-208ENST00000481708 TRAV19A0A0A6YYK7 116 aa2.55□□□□□ -2
SMC6-208ENST00000481708 SPTY2D1-AS1A0A0U1RR47 76 aa2.55□□□□□ -2
SMC6-208ENST00000481708 RPL37AP8A6NKH3 93 aa2.55□□□□□ -2
SMC6-208ENST00000481708 EVPLLA8MZ36 301 aa2.55□□□□□ -2
SMC6-208ENST00000481708 C9J4A7 227 aa2.55□□□□□ -2
SMC6-208ENST00000481708 RAD51CO43502 376 aa2.55□□□□□ -2
SMC6-208ENST00000481708 CNIH1O95406 144 aa2.55□□□□□ -2
SMC6-208ENST00000481708 CD70P32970 193 aa2.55□□□□□ -2
SMC6-208ENST00000481708 STC1P52823 247 aa2.55□□□□□ -2
SMC6-208ENST00000481708 ZNF92Q03936 586 aa2.55□□□□□ -2
SMC6-208ENST00000481708 CKAP4Q07065 602 aaKnown RBP2.55□□□□□ -2
SMC6-208ENST00000481708 FZD2Q14332 565 aa2.55□□□□□ -2
SMC6-208ENST00000481708 ZNF630Q2M218 657 aaPredicted RBP2.55□□□□□ -2
SMC6-208ENST00000481708 REP15Q6BDI9 236 aa2.55□□□□□ -2
SMC6-208ENST00000481708 CLEC20AQ6ZU45 233 aa2.55□□□□□ -2
SMC6-208ENST00000481708 CEACAM19Q7Z692 300 aa2.55□□□□□ -2
SMC6-208ENST00000481708 CALHM1Q8IU99 346 aa2.55□□□□□ -2
SMC6-208ENST00000481708 CA13Q8N1Q1 262 aa2.55□□□□□ -2
SMC6-208ENST00000481708 STPG2Q8N412 459 aa2.55□□□□□ -2
SMC6-208ENST00000481708 SAMD12Q8N8I0 201 aa2.55□□□□□ -2
SMC6-208ENST00000481708 AP3S1Q92572 193 aa2.55□□□□□ -2
SMC6-208ENST00000481708 MRPS31Q92665 395 aaKnown RBP2.55□□□□□ -2
SMC6-208ENST00000481708 ZNF524Q96C55 264 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms