RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 RLFQ13129 1914 aa6.4□□□□□ -1.39
LSM5-210ENST00000480956 TOPAZ1Q8N9V7 1692 aa6.4□□□□□ -1.39
LSM5-210ENST00000480956 ADGRB2O60241 1585 aa6.4□□□□□ -1.39
LSM5-210ENST00000480956 NKTRP30414 1462 aaKnown RBP6.4□□□□□ -1.39
LSM5-210ENST00000480956 ATP7BP35670 1465 aa6.4□□□□□ -1.39
LSM5-210ENST00000480956 A0A1W2PP64 1363 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 OR11H12B2RN74 326 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 TSTD3H0UI37 97 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 TCAPO15273 167 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 NOS1APO75052 506 aaPredicted RBP6.39□□□□□ -1.39
LSM5-210ENST00000480956 THY1P04216 161 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 HPNP05981 417 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 HCKP08631 526 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 OR5H8P0DN80 308 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 PFN3P60673 137 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 CEACAM16Q2WEN9 425 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 BRMS1LQ5PSV4 323 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 HIST2H3PS2Q5TEC6 136 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 DNM1P46Q6ZS02 220 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 CDC20BQ86Y33 519 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 WDSUB1Q8N9V3 476 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 OR11H1Q8NG94 326 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 OR11H2Q8NH07 326 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 BLNKQ8WV28 456 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 RDH5Q92781 318 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 ZHX1-C8orf76Q96EF9 292 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 TIPINQ9BVW5 301 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 MRIQ9BWK5 157 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 TRIM15Q9C019 465 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 TRIM4Q9C037 500 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 MYOZ1Q9NP98 299 aaPredicted RBP6.39□□□□□ -1.39
LSM5-210ENST00000480956 ARMC1Q9NVT9 282 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 FAM135BQ49AJ0 1406 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 PPIP5K1Q6PFW1 1433 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 NSD3Q9BZ95 1437 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 KIF20BQ96Q89 1820 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 TRAV39A0A0B4J263 110 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 J3QT63 122 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 LAD1O00515 517 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 AGPAT2O15120 278 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 RP2O75695 350 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 IGHV1-2P23083 117 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 FKBP3Q00688 224 aaKnown RBP6.39□□□□□ -1.39
LSM5-210ENST00000480956 C17orf58Q2M2W7 97 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 PYCR3Q53H96 274 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 FAM183BPQ6ZVS7 135 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 LRRC29Q8WV35 223 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 ATXN7L3BQ96GX2 97 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 AIF1LQ9BQI0 150 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 XCL2Q9UBD3 114 aa6.39□□□□□ -1.39
LSM5-210ENST00000480956 RALGAPA1Q6GYQ0 2036 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 TDRD15B5MCY1 1934 aaKnown RBP6.38□□□□□ -1.39
LSM5-210ENST00000480956 DENND4AQ7Z401 1863 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 ZBED9Q6R2W3 1325 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 IGLV1-36A0A0B4J1U3 117 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 LY6G6EA0A0G2JKS1 128 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 XKRYO14609 159 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 HCRTR1O43613 425 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 MMP7P09237 267 aaPredicted RBP6.38□□□□□ -1.39
LSM5-210ENST00000480956 TAC1P20366 129 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 ELK4P28324 431 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 VDAC2P45880 294 aaPredicted RBP6.38□□□□□ -1.39
LSM5-210ENST00000480956 QPRTQ15274 297 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 SHHQ15465 462 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 LAMTOR1Q6IAA8 161 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 DHFR2Q86XF0 187 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 RFLNBQ8N5W9 214 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 NPWQ8N729 165 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 ARIH2OSQ8N7S6 290 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 NEIL3Q8TAT5 605 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 TAF15Q92804 592 aaKnown RBP eCLIP6.38□□□□□ -1.39
LSM5-210ENST00000480956 CPNE2Q96FN4 548 aaPredicted RBP6.38□□□□□ -1.39
LSM5-210ENST00000480956 FAM19A4Q96LR4 140 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 YTHDF1Q9BYJ9 559 aaKnown RBP6.38□□□□□ -1.39
LSM5-210ENST00000480956 NMNAT1Q9HAN9 279 aaPredicted RBP6.38□□□□□ -1.39
LSM5-210ENST00000480956 PRELID3BQ9Y3B1 194 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 ORC6Q9Y5N6 252 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 AKAP12Q02952 1782 aa6.38□□□□□ -1.39
LSM5-210ENST00000480956 CDC42BPGQ6DT37 1551 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 A0A087WW49 117 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 OR6C6A6NF89 314 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 EVPLLA8MZ36 301 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 FAM220BPB1ANY3 271 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 C15orf65H3BRN8 121 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 NDUFA2O43678 99 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 CHP2O43745 196 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 CA11O75493 328 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 IGKV1D-16P01601 117 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 IGKV5-2P06315 115 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 IGLL1P15814 213 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 GNB3P16520 340 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 GGT2P36268 569 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 NDUFV3P56181 108 aaKnown RBP6.37□□□□□ -1.39
LSM5-210ENST00000480956 TAS2R43P59537 309 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 CYCSP99999 105 aaKnown RBP6.37□□□□□ -1.39
LSM5-210ENST00000480956 PRDX1Q06830 199 aaKnown RBP6.37□□□□□ -1.39
LSM5-210ENST00000480956 ZNF146Q15072 292 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 TSNQ15631 228 aaKnown RBP6.37□□□□□ -1.39
LSM5-210ENST00000480956 ACSBG2Q5FVE4 666 aa6.37□□□□□ -1.39
LSM5-210ENST00000480956 CYHR1Q6ZMK1 362 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms