RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 TNRC6BQ9UPQ9 1833 aaKnown RBP21.37■■□□□ 1.01
SYNGAP1-206ENST00000479510 hCG_38984A0A1B0GV85 526 aa21.36■■□□□ 1.01
SYNGAP1-206ENST00000479510 RFC3P40938 356 aa21.36■■□□□ 1.01
SYNGAP1-206ENST00000479510 LIAT1Q6ZQX7 453 aa21.36■■□□□ 1.01
SYNGAP1-206ENST00000479510 CBLN2Q8IUK8 224 aa21.36■■□□□ 1.01
SYNGAP1-206ENST00000479510 SKA3Q8IX90 412 aa21.36■■□□□ 1.01
SYNGAP1-206ENST00000479510 OR10AD1Q8NGE0 317 aa21.36■■□□□ 1.01
SYNGAP1-206ENST00000479510 C18orf12Q96KH6 178 aa21.36■■□□□ 1.01
SYNGAP1-206ENST00000479510 OR2H1Q9GZK4 316 aa21.36■■□□□ 1.01
SYNGAP1-206ENST00000479510 LSM5Q9Y4Y9 91 aaKnown RBP21.36■■□□□ 1.01
SYNGAP1-206ENST00000479510 NPBWR1P48145 328 aa21.36■■□□□ 1.01
SYNGAP1-206ENST00000479510 RRADP55042 308 aa21.36■■□□□ 1.01
SYNGAP1-206ENST00000479510 PDZK1IP1Q13113 114 aa21.36■■□□□ 1.01
SYNGAP1-206ENST00000479510 TMEM211Q6ICI0 200 aa21.36■■□□□ 1.01
SYNGAP1-206ENST00000479510 LINC00518Q8N0U6 118 aa21.36■■□□□ 1.01
SYNGAP1-206ENST00000479510 OR14L1PQ8NHC6 308 aa21.36■■□□□ 1.01
SYNGAP1-206ENST00000479510 MOB3AQ96BX8 217 aa21.36■■□□□ 1.01
SYNGAP1-206ENST00000479510 FAM96BQ9Y3D0 163 aa21.36■■□□□ 1.01
SYNGAP1-206ENST00000479510 MED12Q93074 2177 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 BORCS7-ASMTA0A0B4J1R7 106 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 PDCD6O75340 191 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 SFTA3P0C7M3 94 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 SEC11BP0C7V7 166 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 OPRM1P35372 400 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 PSG4Q00888 419 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 SWI5Q1ZZU3 235 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 NRN1LQ496H8 165 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 WDR5BQ86VZ2 330 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 LGI3Q8N145 548 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 FOXB1Q99853 325 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 XRCC2O43543 280 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 GPR137BO60478 399 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 MBPP02686 304 aaPredicted RBP21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 OR5AC1P0C628 307 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 CCL4P13236 92 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 PAX6P26367 422 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 IL13RA2Q14627 380 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 FAM76BQ5HYJ3 339 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 ZNF468Q5VIY5 522 aaPredicted RBP21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 CCDC71LQ8N9Z2 235 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 OR2V1Q8NHB1 315 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 ADGRG7Q96K78 797 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 ADAT1Q9BUB4 502 aaKnown RBP21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 WNT5BQ9H1J7 359 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 ATPIF1Q9UII2 106 aa21.35■■□□□ 1.01
SYNGAP1-206ENST00000479510 PI4KAP42356 2102 aa21.34■■□□□ 1.01
SYNGAP1-206ENST00000479510 GEMIN2O14893 280 aaKnown RBP21.34■■□□□ 1.01
SYNGAP1-206ENST00000479510 B4GALT1P15291 398 aa21.34■■□□□ 1.01
SYNGAP1-206ENST00000479510 TCN2P20062 427 aa21.34■■□□□ 1.01
SYNGAP1-206ENST00000479510 DUSP1P28562 367 aa21.34■■□□□ 1.01
SYNGAP1-206ENST00000479510 NTF4P34130 210 aa21.34■■□□□ 1.01
SYNGAP1-206ENST00000479510 GLP1RP43220 463 aa21.34■■□□□ 1.01
SYNGAP1-206ENST00000479510 MALLQ13021 153 aa21.34■■□□□ 1.01
SYNGAP1-206ENST00000479510 FAM219AQ8IW50 185 aa21.34■■□□□ 1.01
SYNGAP1-206ENST00000479510 FBXL14Q8N1E6 418 aa21.34■■□□□ 1.01
SYNGAP1-206ENST00000479510 TOMM40LQ969M1 308 aa21.34■■□□□ 1.01
SYNGAP1-206ENST00000479510 SPSB4Q96A44 273 aa21.34■■□□□ 1.01
SYNGAP1-206ENST00000479510 SLC2A9Q9NRM0 540 aa21.34■■□□□ 1.01
SYNGAP1-206ENST00000479510 MYO7BQ6PIF6 2116 aa21.34■■□□□ 1.01
SYNGAP1-206ENST00000479510 IGKV1-12A0A0C4DH73 117 aa21.33■■□□□ 1.01
SYNGAP1-206ENST00000479510 ZNF816-ZNF321PA0A0X1KG74 233 aa21.33■■□□□ 1.01
SYNGAP1-206ENST00000479510 IGKV1D-12P01611 117 aa21.33■■□□□ 1.01
SYNGAP1-206ENST00000479510 P2RY1P47900 373 aa21.33■■□□□ 1.01
SYNGAP1-206ENST00000479510 HOXA1P49639 335 aaPredicted RBP21.33■■□□□ 1.01
SYNGAP1-206ENST00000479510 RSPO4Q2I0M5 234 aaPredicted RBP21.33■■□□□ 1.01
SYNGAP1-206ENST00000479510 Q6ZRG5 221 aa21.33■■□□□ 1.01
SYNGAP1-206ENST00000479510 YRDCQ86U90 279 aaKnown RBP21.33■■□□□ 1.01
SYNGAP1-206ENST00000479510 KDF1Q8NAX2 398 aaPredicted RBP21.33■■□□□ 1.01
SYNGAP1-206ENST00000479510 AKR7LQ8NHP1 331 aa21.33■■□□□ 1.01
SYNGAP1-206ENST00000479510 FBXO9Q9UK97 447 aaPredicted RBP21.33■■□□□ 1.01
SYNGAP1-206ENST00000479510 ST3GAL6Q9Y274 331 aa21.33■■□□□ 1.01
SYNGAP1-206ENST00000479510 UCP2P55851 309 aa21.33■■□□□ 1
SYNGAP1-206ENST00000479510 PEAR1Q5VY43 1037 aaPredicted RBP21.33■■□□□ 1
SYNGAP1-206ENST00000479510 SLC22A25Q6T423 547 aa21.33■■□□□ 1
SYNGAP1-206ENST00000479510 RSRP1Q9BUV0 290 aa21.33■■□□□ 1
SYNGAP1-206ENST00000479510 PLSCR2Q9NRY7 297 aa21.33■■□□□ 1
SYNGAP1-206ENST00000479510 PLA2G2EQ9NZK7 142 aa21.33■■□□□ 1
SYNGAP1-206ENST00000479510 STARD10Q9Y365 291 aa21.33■■□□□ 1
SYNGAP1-206ENST00000479510 TMED3Q9Y3Q3 217 aa21.33■■□□□ 1
SYNGAP1-206ENST00000479510 KPTNQ9Y664 436 aa21.33■■□□□ 1
SYNGAP1-206ENST00000479510 FAM90A10PA6NDY2 464 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 FAM90A18PA6NE21 464 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 FAM90A16PA6NEW6 464 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 FAM90A20PA6NIJ5 464 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 FAM90A8PA6NJQ4 464 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 FAM90A7PA6NKC0 464 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 FAM90A22PA8MWA6 464 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 FAM90A12PA8MX19 464 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 FAM90A5PA8MXJ8 464 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 FAM90A23PA8MXZ1 464 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 FAM157AC9JC47 383 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 FAM90A15PP0C7V4 464 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 FAM90A13PP0C7W8 464 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 FAM90A14PP0C7W9 464 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 FAM90A24PP0C7X0 464 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 RAB5CP51148 216 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 SRPXP78539 464 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 PIGYQ3MUY2 71 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 FAM185AQ8N0U4 392 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 Q8NFD4 153 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms