RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 PRKYO43930 277 aa10.68□□□□□ -0.7
VCL-205ENST00000478896 FKBP6O75344 327 aa10.68□□□□□ -0.7
VCL-205ENST00000478896 SRSF10O75494 262 aaKnown RBP10.68□□□□□ -0.7
VCL-205ENST00000478896 DNAJC8O75937 253 aaPredicted RBP10.68□□□□□ -0.7
VCL-205ENST00000478896 INMTO95050 263 aa10.68□□□□□ -0.7
VCL-205ENST00000478896 RPP14O95059 124 aaKnown RBP10.68□□□□□ -0.7
VCL-205ENST00000478896 RBP4P02753 201 aa10.68□□□□□ -0.7
VCL-205ENST00000478896 CD33P20138 364 aa10.68□□□□□ -0.7
VCL-205ENST00000478896 DLX6P56179 175 aa10.68□□□□□ -0.7
VCL-205ENST00000478896 SLC34A1Q06495 639 aa10.68□□□□□ -0.7
VCL-205ENST00000478896 FLOT2Q14254 428 aa10.68□□□□□ -0.7
VCL-205ENST00000478896 BCDIN3DQ7Z5W3 292 aaKnown RBP10.68□□□□□ -0.7
VCL-205ENST00000478896 OR8H2Q8N162 312 aa10.68□□□□□ -0.7
VCL-205ENST00000478896 ZNF676Q8N7Q3 588 aa10.68□□□□□ -0.7
VCL-205ENST00000478896 CCDC197Q8NCU1 140 aa10.68□□□□□ -0.7
VCL-205ENST00000478896 NDNFQ8TB73 568 aa10.68□□□□□ -0.7
VCL-205ENST00000478896 CEP19Q96LK0 163 aa10.68□□□□□ -0.7
VCL-205ENST00000478896 MNTQ99583 582 aa10.68□□□□□ -0.7
VCL-205ENST00000478896 DNAJB9Q9UBS3 223 aa10.68□□□□□ -0.7
VCL-205ENST00000478896 DHRS7CA6NNS2 312 aa10.67□□□□□ -0.7
VCL-205ENST00000478896 H3BUI4 141 aa10.67□□□□□ -0.7
VCL-205ENST00000478896 M0R129 80 aa10.67□□□□□ -0.7
VCL-205ENST00000478896 PF4V1P10720 104 aa10.67□□□□□ -0.7
VCL-205ENST00000478896 ERVK11-1P61568 191 aa10.67□□□□□ -0.7
VCL-205ENST00000478896 ACTA2P62736 377 aa10.67□□□□□ -0.7
VCL-205ENST00000478896 ACTG2P63267 376 aa10.67□□□□□ -0.7
VCL-205ENST00000478896 ACTC1P68032 377 aa10.67□□□□□ -0.7
VCL-205ENST00000478896 ACTA1P68133 377 aa10.67□□□□□ -0.7
VCL-205ENST00000478896 PTGES3Q15185 160 aaKnown RBP10.67□□□□□ -0.7
VCL-205ENST00000478896 TMEM95Q3KNT9 176 aa10.67□□□□□ -0.7
VCL-205ENST00000478896 NXNL2Q5VZ03 156 aa10.67□□□□□ -0.7
VCL-205ENST00000478896 MEPCEQ7L2J0 689 aaKnown RBP10.67□□□□□ -0.7
VCL-205ENST00000478896 YIPF7Q8N8F6 280 aa10.67□□□□□ -0.7
VCL-205ENST00000478896 OR11H6Q8NGC7 330 aa10.67□□□□□ -0.7
VCL-205ENST00000478896 EMG1Q92979 244 aaKnown RBP10.67□□□□□ -0.7
VCL-205ENST00000478896 SLAMF9Q96A28 289 aa10.67□□□□□ -0.7
VCL-205ENST00000478896 CADM1Q9BY67 442 aaKnown RBP10.67□□□□□ -0.7
VCL-205ENST00000478896 ADGRL4Q9HBW9 690 aa10.67□□□□□ -0.7
VCL-205ENST00000478896 A0A1B0GTI1 187 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 hADV38S2A0JD32 116 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 SYT7O43581 403 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 ZNF737O75373 536 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 GATBO75879 557 aaKnown RBP10.66□□□□□ -0.7
VCL-205ENST00000478896 FAM107AO95990 144 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 PF4P02776 101 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 KRT8P05787 483 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 T-ENOLP0DO92 83 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 GABRR1P24046 479 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 BLCAPP62952 87 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 GRK1Q15835 563 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 LDLRAD2Q5SZI1 272 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 MINOS1Q5TGZ0 78 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 TCF23Q7RTU1 214 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 TRAPPC6BQ86SZ2 158 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 TPRX1Q8N7U7 411 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 TCEANCQ8N8B7 351 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 CAPSLQ8WWF8 208 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 BORCS8Q96FH0 119 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 SNX22Q96L94 193 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 TBX5Q99593 518 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 ADI1Q9BV57 179 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 WNT10AQ9GZT5 417 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 CHST6Q9GZX3 395 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 KRT84Q9NSB2 600 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 CLN6Q9NWW5 311 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 MRM2Q9UI43 246 aaKnown RBP10.66□□□□□ -0.7
VCL-205ENST00000478896 SESN1Q9Y6P5 492 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 MINOS1-NBL1R4GNA1 71 aa10.66□□□□□ -0.7
VCL-205ENST00000478896 IGHV2-26A0A0B4J1V2 119 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 ADARB2-AS1A8MUL3 147 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 HAND1O96004 215 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 JUNBP17275 347 aaPredicted RBP10.65□□□□□ -0.7
VCL-205ENST00000478896 CCL1P22362 96 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 AZGP1P25311 298 aaKnown RBP10.65□□□□□ -0.7
VCL-205ENST00000478896 PEX2P28328 305 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 DAPP51397 102 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 DYNLT3P51808 116 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 MEF2CQ06413 473 aaPredicted RBP10.65□□□□□ -0.7
VCL-205ENST00000478896 IL18R1Q13478 541 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 FOXB2Q5VYV0 432 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 SLX4IPQ5VYV7 408 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 Q6ZS46 218 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 ZBTB49Q6ZSB9 765 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 SLC25A26Q70HW3 274 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 EGFL6Q8IUX8 553 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 GID4Q8IVV7 300 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 OR5AU1Q8NGC0 362 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 NRBF2Q96F24 287 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 AKR1E2Q96JD6 320 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 CLEC7AQ9BXN2 247 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 CHST5Q9GZS9 411 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 MTCH1Q9NZJ7 389 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 LINC00312Q9Y6C7 94 aa10.65□□□□□ -0.7
VCL-205ENST00000478896 F8VVB4 439 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 F8VWA3 439 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 GYG2O15488 501 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 MPIG6BO95866 241 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 CYB5AP00167 134 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 SERPINA3P01011 423 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 IGHA1P01876 353 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms