RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 A0A1W2PP11 408 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 CEACAM18A8MTB9 384 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 GYPAP02724 150 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 DUX4L2P0CJ85 424 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 DUX4L3P0CJ86 424 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 DUX4L4P0CJ87 422 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 DUX4L5P0CJ88 424 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 DUX4L6P0CJ89 424 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 DUX4L7P0CJ90 424 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 MUC1P15941 1255 aaPredicted RBP11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 PRKACAP17612 351 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 CFPP27918 469 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 HTR2CP28335 458 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 IL2RGP31785 369 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 SNU13P55769 128 aaKnown RBP11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 BLMHQ13867 455 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 P2RY14Q15391 338 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 RSU1Q15404 277 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 RAB11BQ15907 218 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 MICBQ29980 383 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 TMEM155Q4W5P6 130 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 HES5Q5TA89 166 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 DUX4L9Q6RFH8 374 aaPredicted RBP11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 LYPD2Q6UXB3 125 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 TPRA1Q86W33 373 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 FAM58AQ8N1B3 248 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 MUC20Q8N307 709 aaPredicted RBP11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 OR5T2Q8NGG2 359 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 OR6M1Q8NGM8 313 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 ANGPTL6Q8NI99 470 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 NDNFQ8TB73 568 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 TBC1D15Q8TC07 691 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 C12orf43Q96C57 262 aaKnown RBP11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 REG4Q9BYZ8 158 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 METTL9Q9H1A3 318 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 ELL3Q9HB65 397 aaPredicted RBP11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 PLGRKTQ9HBL7 147 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 HMG20AQ9NP66 347 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 IL36GQ9NZH8 169 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 DUX4Q9UBX2 424 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 ZNF222Q9UK12 451 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 ING4Q9UNL4 249 aa11.32□□□□□ -0.6
NUDCD3-207ENST00000478769 IFITM5A6NNB3 132 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 OR2AT4A6NND4 320 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 NOTOA8MTQ0 251 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 F5H0A9 414 aaPredicted RBP11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 H7C1Q1 480 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 AIPO00170 330 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 TNFRSF13BO14836 293 aaPredicted RBP11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 KNG1P01042 644 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 IGHV2-5P01817 119 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 PSG2P11465 335 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 AMY2BP19961 511 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 SERPINA2P20848 420 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 USF1P22415 310 aaPredicted RBP11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 CEBPDP49716 269 aaPredicted RBP11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 CLDN12P56749 244 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 LMO4P61968 165 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 DGUOKQ16854 277 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 SLC22A6Q4U2R8 563 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 ELP2Q6IA86 826 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 DCDC5Q6ZRR9 648 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 CIARTQ8N365 385 aaPredicted RBP11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 SPICQ8N5J4 248 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 MAPK1IP1LQ8NDC0 245 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 Q8NFD4 153 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 RBM38Q9H0Z9 239 aaKnown RBP11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 RHOFQ9HBH0 211 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 CTSZQ9UBR2 303 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 CR1P17927 2039 aa11.31□□□□□ -0.6
NUDCD3-207ENST00000478769 A0A0B4J203 849 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 RFPL4AA6NLU0 287 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 RFPL4AL1F8VTS6 287 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 FCN3O75636 299 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 HTR3BO95264 441 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 VSIG8P0DPA2 414 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 SLC2A2P11168 524 aaPredicted RBP11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 SELLP14151 372 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 RPS2P15880 293 aaKnown RBP11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 RPS19P39019 145 aaKnown RBP11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 SERPINB10P48595 397 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 PSMD7P51665 324 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 FGF12P61328 243 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 SEC61A1P61619 476 aaKnown RBP11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 LOXL1Q08397 574 aaPredicted RBP11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 KCNJ8Q15842 424 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 PIGYQ3MUY2 71 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 SFXN4Q6P4A7 337 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 SPNS3Q6ZMD2 512 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 CD177Q8N6Q3 437 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 FAM216BQ8N7L0 139 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 TMEM104Q8NE00 496 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 RAB2BQ8WUD1 216 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 ISOC1Q96CN7 298 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 GAFA1Q96PS6 74 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 S100A13Q99584 98 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 CCL13Q99616 98 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 ZNF665Q9H7R5 613 aa11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 PATZ1Q9HBE1 687 aaKnown RBP11.3□□□□□ -0.6
NUDCD3-207ENST00000478769 OR14J1Q9UGF5 321 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms