RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, human

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM13-208	ENST00000478111	NXNL2	Q5VZ03	156 aa		13.45	□□□□□ -0.26
TRIM13-208	ENST00000478111	SSX6	Q7RTT6	188 aa		13.45	□□□□□ -0.26
TRIM13-208	ENST00000478111	TCEANC	Q8N8B7	351 aa		13.45	□□□□□ -0.26
TRIM13-208	ENST00000478111	OR13D1	Q8NGV5	346 aa		13.45	□□□□□ -0.26
TRIM13-208	ENST00000478111	TRMT10A	Q8TBZ6	339 aa	Known RBP	13.45	□□□□□ -0.26
TRIM13-208	ENST00000478111	MNT	Q99583	582 aa		13.45	□□□□□ -0.26
TRIM13-208	ENST00000478111	CLN6	Q9NWW5	311 aa		13.45	□□□□□ -0.26
TRIM13-208	ENST00000478111	TMEM82	A0PJX8	343 aa		13.44	□□□□□ -0.26
TRIM13-208	ENST00000478111	MITF	O75030	526 aa	Predicted RBP	13.44	□□□□□ -0.26
TRIM13-208	ENST00000478111	CHRM2	P08172	466 aa		13.44	□□□□□ -0.26
TRIM13-208	ENST00000478111	DYNLT3	P51808	116 aa		13.44	□□□□□ -0.26
TRIM13-208	ENST00000478111	BLCAP	P62952	87 aa		13.44	□□□□□ -0.26
TRIM13-208	ENST00000478111	SLX4IP	Q5VYV7	408 aa		13.44	□□□□□ -0.26
TRIM13-208	ENST00000478111	REC114	Q7Z4M0	266 aa		13.44	□□□□□ -0.26
TRIM13-208	ENST00000478111	NDUFA11	Q86Y39	141 aa		13.44	□□□□□ -0.26
TRIM13-208	ENST00000478111	ASCC1	Q8N9N2	400 aa	Known RBP	13.44	□□□□□ -0.26
TRIM13-208	ENST00000478111	TMEM163	Q8TC26	289 aa		13.44	□□□□□ -0.26
TRIM13-208	ENST00000478111	RPS4Y2	Q8TD47	263 aa		13.44	□□□□□ -0.26
TRIM13-208	ENST00000478111	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.44	□□□□□ -0.26
TRIM13-208	ENST00000478111	CITED2	Q99967	270 aa	Predicted RBP	13.44	□□□□□ -0.26
TRIM13-208	ENST00000478111	CADM1	Q9BY67	442 aa	Known RBP	13.44	□□□□□ -0.26
TRIM13-208	ENST00000478111	POMP	Q9Y244	141 aa		13.44	□□□□□ -0.26
TRIM13-208	ENST00000478111	FAM230A	A0A1W2PPH8	454 aa		13.43	□□□□□ -0.26
TRIM13-208	ENST00000478111	ZAR1L	A6NP61	321 aa		13.43	□□□□□ -0.26
TRIM13-208	ENST00000478111	ZNF670-ZNF695	F2Z2N8	137 aa		13.43	□□□□□ -0.26
TRIM13-208	ENST00000478111	XPNPEP2	O43895	674 aa		13.43	□□□□□ -0.26
TRIM13-208	ENST00000478111	EDDM3B	P56851	147 aa		13.43	□□□□□ -0.26
TRIM13-208	ENST00000478111	ACTR3	P61158	418 aa		13.43	□□□□□ -0.26
TRIM13-208	ENST00000478111	C12orf73	Q69YU5	71 aa		13.43	□□□□□ -0.26
TRIM13-208	ENST00000478111	CATSPERD	Q86XM0	798 aa		13.43	□□□□□ -0.26
TRIM13-208	ENST00000478111	OR8H2	Q8N162	312 aa		13.43	□□□□□ -0.26
TRIM13-208	ENST00000478111	CEP19	Q96LK0	163 aa		13.43	□□□□□ -0.26
TRIM13-208	ENST00000478111	PRSS22	Q9GZN4	317 aa		13.43	□□□□□ -0.26
TRIM13-208	ENST00000478111	ABCB10	Q9NRK6	738 aa		13.43	□□□□□ -0.26
TRIM13-208	ENST00000478111	PITPNC1	Q9UKF7	332 aa		13.43	□□□□□ -0.26
TRIM13-208	ENST00000478111	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
TRIM13-208	ENST00000478111	ZNF281	Q9Y2X9	895 aa		13.43	□□□□□ -0.26
TRIM13-208	ENST00000478111		H3BSH0	61 aa		13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	PIN1P1	O15428	100 aa		13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	RPP14	O95059	124 aa	Known RBP	13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	MEF2C	Q06413	473 aa	Predicted RBP	13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	ODF4	Q2M2E3	257 aa		13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	GDPD3	Q7L5L3	318 aa		13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	OR4S1	Q8NGB4	309 aa		13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	OR52N4	Q8NGI2	321 aa		13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	SLAMF9	Q96A28	289 aa		13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	R3HDM4	Q96D70	268 aa		13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	SNX22	Q96L94	193 aa		13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	ZNF714	Q96N38	554 aa		13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	OR5M11	Q96RB7	305 aa		13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	IL4I1	Q96RQ9	567 aa		13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	OCSTAMP	Q9BR26	566 aa		13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	SEBOX	Q9HB31	216 aa	Predicted RBP	13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	H2AFY2	Q9P0M6	372 aa	Predicted RBP	13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	IL36RN	Q9UBH0	155 aa		13.42	□□□□□ -0.26
TRIM13-208	ENST00000478111	FAM90A22P	A8MWA6	464 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	INMT	O95050	263 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	IGHA1	P01876	353 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	FUT6	P51993	359 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	ACTA2	P62736	377 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	ACTG2	P63267	376 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	ACTC1	P68032	377 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	ACTA1	P68133	377 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	DYNC1I2	Q13409	638 aa	Known RBP	13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	TMEM95	Q3KNT9	176 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	TPRX1	Q8N7U7	411 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	YIPF7	Q8N8F6	280 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	OR4F17	Q8NGA8	305 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	RNF166	Q96A37	237 aa	Predicted RBP	13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	OR4F4	Q96R69	305 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	TBX5	Q99593	518 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	PRRG3	Q9BZD7	231 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	CHST5	Q9GZS9	411 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	NECAP2	Q9NVZ3	263 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	SLC7A11	Q9UPY5	501 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	HILPDA	Q9Y5L2	63 aa		13.41	□□□□□ -0.26
TRIM13-208	ENST00000478111	IGHV2-26	A0A0B4J1V2	119 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	GYG2	O15488	501 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	SYT7	O43581	403 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	NPBWR2	P48146	333 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	OR12D2	P58182	307 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	DNAL1	Q4LDG9	190 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	MINOS1	Q5TGZ0	78 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	KDM4D	Q6B0I6	523 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	SLC25A26	Q70HW3	274 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	EGFL6	Q8IUX8	553 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	PRSS35	Q8N3Z0	413 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	WFDC9	Q8NEX5	89 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	MRAP	Q8TCY5	172 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	PHF21A	Q96BD5	680 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	KRT84	Q9NSB2	600 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	LINC00312	Q9Y6C7	94 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	SESN1	Q9Y6P5	492 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111	MINOS1-NBL1	R4GNA1	71 aa		13.4	□□□□□ -0.26
TRIM13-208	ENST00000478111		A0A1W2PQL4	384 aa	Predicted RBP	13.39	□□□□□ -0.27
TRIM13-208	ENST00000478111	hADV38S2	A0JD32	116 aa		13.39	□□□□□ -0.27
TRIM13-208	ENST00000478111	METTL15	A6NJ78	407 aa		13.39	□□□□□ -0.27
TRIM13-208	ENST00000478111	PSPN	O60542	156 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms