RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 OR11H7Q8NGC8 314 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 OR4D10Q8NGI6 311 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 OR13C8Q8NGS7 320 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 GRPEL2Q8TAA5 225 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 EMG1Q92979 244 aaKnown RBP6.82□□□□□ -1.32
VMA21-203ENST00000477649 DVL3Q92997 716 aaPredicted RBP6.82□□□□□ -1.32
VMA21-203ENST00000477649 FBXW5Q969U6 566 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 ABHD17AQ96GS6 310 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 SLC6A7Q99884 636 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 CMSS1Q9BQ75 279 aaKnown RBP6.82□□□□□ -1.32
VMA21-203ENST00000477649 TMPRSS13Q9BYE2 586 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 PPA2Q9H2U2 334 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 POFUT1Q9H488 388 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 IFT22Q9H7X7 185 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 C12orf4Q9NQ89 552 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 SHPKQ9UHJ6 478 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 MGAT4AQ9UM21 535 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 FLVCR2Q9UPI3 526 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 ASPMQ8IZT6 3477 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 SPEGQ15772 3267 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 WDFY3Q8IZQ1 3526 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 PIGBOS1A0A0B4J2F0 54 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 A0A1W2PP11 408 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 MED19A0JLT2 244 aaPredicted RBP6.81□□□□□ -1.32
VMA21-203ENST00000477649 ZNF732B4DXR9 585 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 M0QYG6 137 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 FABP7O15540 132 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 SPRY1O43609 319 aaPredicted RBP6.81□□□□□ -1.32
VMA21-203ENST00000477649 ANGPTL7O43827 346 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 LYZL6O75951 148 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 PDGFAP04085 211 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 CTXN2P0C2S0 81 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 ZNF35P13682 527 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 KITLGP21583 273 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 GABRR1P24046 479 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 FPR2P25090 351 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 HAAOP46952 286 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 ARPC4P59998 168 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 SEC61A1P61619 476 aaKnown RBP6.81□□□□□ -1.32
VMA21-203ENST00000477649 FGL1Q08830 312 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 RBM39Q14498 530 aaKnown RBP6.81□□□□□ -1.32
VMA21-203ENST00000477649 TAF9Q16594 264 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 MICBQ29980 383 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 ZNF718Q3SXZ3 478 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 TMEM128Q5BJH2 165 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 MBNL2Q5VZF2 373 aaKnown RBP6.81□□□□□ -1.32
VMA21-203ENST00000477649 VWA1Q6PCB0 445 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 FIP1L1Q6UN15 594 aaKnown RBP6.81□□□□□ -1.32
VMA21-203ENST00000477649 RFPL4BQ6ZWI9 263 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 OVCH2Q7RTZ1 564 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 RNF144BQ7Z419 303 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 CD163Q86VB7 1156 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 LHFPL1Q86WI0 220 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 FBXL14Q8N1E6 418 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 C12orf45Q8N5I9 185 aaPredicted RBP6.81□□□□□ -1.32
VMA21-203ENST00000477649 GVQW1Q8N7I0 195 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 ZNF610Q8N9Z0 462 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 OR2AK2Q8NG84 335 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 OR4S1Q8NGB4 309 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 OR1J1Q8NGS3 322 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 OR10K1Q8NGX5 313 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 HPSE2Q8WWQ2 592 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 MUCL1Q96DR8 90 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 DMRTB1Q96MA1 342 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 PHB2Q99623 299 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 VRK1Q99986 396 aaPredicted RBP6.81□□□□□ -1.32
VMA21-203ENST00000477649 ZNF286AQ9HBT8 521 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 DLL4Q9NR61 685 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 DECR2Q9NUI1 292 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 NECAP2Q9NVZ3 263 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 ELOVL5Q9NYP7 299 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 RCC2Q9P258 522 aaKnown RBP6.81□□□□□ -1.32
VMA21-203ENST00000477649 MGAT4CQ9UBM8 478 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 ZNF629Q9UEG4 869 aaPredicted RBP6.81□□□□□ -1.32
VMA21-203ENST00000477649 GPR160Q9UJ42 338 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 ANXA10Q9UJ72 324 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 SPTBN2O15020 2390 aa6.81□□□□□ -1.32
VMA21-203ENST00000477649 TPRP12270 2363 aaKnown RBP6.8□□□□□ -1.32
VMA21-203ENST00000477649 TRBV6-6A0A0A6YYG2 114 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 IGKV1-12A0A0C4DH73 117 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 KIR2DS1A0A191URI9 304 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 A0A1B0GWJ7 208 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 A8MV72 311 aaPredicted RBP6.8□□□□□ -1.32
VMA21-203ENST00000477649 MCRIP1C9JLW8 97 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 NOS1APO75052 506 aaPredicted RBP6.8□□□□□ -1.32
VMA21-203ENST00000477649 DUS4LO95620 317 aaKnown RBP6.8□□□□□ -1.32
VMA21-203ENST00000477649 IGKV1D-12P01611 117 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 PMP2P02689 132 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 SFTPBP07988 381 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 VSIG10L2P0DP72 767 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 CCL2P13500 99 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 DNASE1P24855 282 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 GCH1P30793 250 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 CALCRP30988 508 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 MDH2P40926 338 aaKnown RBP6.8□□□□□ -1.32
VMA21-203ENST00000477649 KIR2DS4P43632 304 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 GPM6AP51674 278 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 RPS23P62266 143 aaKnown RBP6.8□□□□□ -1.32
VMA21-203ENST00000477649 CYCSP99999 105 aaKnown RBP6.8□□□□□ -1.32
VMA21-203ENST00000477649 SRSF4Q08170 494 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms