RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 ATP6V0CP27449 155 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 APLNRP35414 380 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 HLA-DRB3P79483 266 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 ICAM4Q14773 271 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 SLC10A1Q14973 349 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 ABCA11PQ4W5N1 156 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 C2orf27AQ580R0 203 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 SLC25A24Q6NUK1 477 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 MEX3BQ6ZN04 569 aaKnown RBP11.78□□□□□ -0.52
DFFB-209ENST00000477548 SCARF2Q96GP6 870 aaPredicted RBP11.78□□□□□ -0.52
DFFB-209ENST00000477548 SHDQ96IW2 340 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 FAM60AQ9NP50 221 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 NPIPA1Q9UND3 350 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 MUC22E2RYF6 1773 aaPredicted RBP11.78□□□□□ -0.52
DFFB-209ENST00000477548 IGKV1D-8A0A087WSZ0 117 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 IGKV1D-43A0A0B4J1Z2 117 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 HSBP1L1C9JCN9 74 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 TGOLN2O43493 480 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 AHSA1O95433 338 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 HSPB1P04792 205 aaKnown RBP11.78□□□□□ -0.52
DFFB-209ENST00000477548 MDKP21741 143 aaPredicted RBP11.78□□□□□ -0.52
DFFB-209ENST00000477548 IL13RA2Q14627 380 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 OOSP2Q86WS3 158 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 METTL27Q8N6F8 245 aaPredicted RBP11.78□□□□□ -0.52
DFFB-209ENST00000477548 OR52M1Q8NGK5 317 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 HAS2Q92819 552 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 GAL3ST4Q96RP7 486 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 PECRQ9BY49 303 aa11.78□□□□□ -0.52
DFFB-209ENST00000477548 A8MXE2 369 aa11.77□□□□□ -0.52
DFFB-209ENST00000477548 C17orf105B2RV13 164 aa11.77□□□□□ -0.52
DFFB-209ENST00000477548 RPL23AP62750 156 aaKnown RBP11.77□□□□□ -0.52
DFFB-209ENST00000477548 EWSR1Q01844 656 aaKnown RBP eCLIP11.77□□□□□ -0.52
DFFB-209ENST00000477548 ZNF266Q14584 549 aa11.77□□□□□ -0.52
DFFB-209ENST00000477548 GNMTQ14749 295 aa11.77□□□□□ -0.52
DFFB-209ENST00000477548 C5orf24Q7Z6I8 188 aa11.77□□□□□ -0.52
DFFB-209ENST00000477548 TMEM183AQ8IXX5 376 aa11.77□□□□□ -0.52
DFFB-209ENST00000477548 DMDP11532 3685 aa11.77□□□□□ -0.52
DFFB-209ENST00000477548 COL6A3P12111 3177 aa11.77□□□□□ -0.53
DFFB-209ENST00000477548 DHRS7CA6NNS2 312 aa11.77□□□□□ -0.53
DFFB-209ENST00000477548 IGHMP01871 453 aa11.77□□□□□ -0.53
DFFB-209ENST00000477548 PGCP20142 388 aa11.77□□□□□ -0.53
DFFB-209ENST00000477548 FUT3P21217 361 aa11.77□□□□□ -0.53
DFFB-209ENST00000477548 DUSP1P28562 367 aa11.77□□□□□ -0.53
DFFB-209ENST00000477548 H3F3AP84243 136 aa11.77□□□□□ -0.53
DFFB-209ENST00000477548 COL13A1Q5TAT6 717 aaPredicted RBP11.77□□□□□ -0.53
DFFB-209ENST00000477548 TSPO2Q5TGU0 170 aa11.77□□□□□ -0.53
DFFB-209ENST00000477548 PARM1Q6UWI2 310 aa11.77□□□□□ -0.53
DFFB-209ENST00000477548 TIPARPQ7Z3E1 657 aaKnown RBP11.77□□□□□ -0.53
DFFB-209ENST00000477548 OR14L1PQ8NHC6 308 aa11.77□□□□□ -0.53
DFFB-209ENST00000477548 NPRL2Q8WTW4 380 aa11.77□□□□□ -0.53
DFFB-209ENST00000477548 VN1R1Q9GZP7 353 aa11.77□□□□□ -0.53
DFFB-209ENST00000477548 ELL3Q9HB65 397 aaPredicted RBP11.77□□□□□ -0.53
DFFB-209ENST00000477548 H0Y8X5 98 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 CLDN34H7C241 214 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 AMBPP02760 352 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 IL11P20809 199 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 OMGP23515 440 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 SFTPDP35247 375 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 IGLV3-21P80748 117 aaPredicted RBP11.76□□□□□ -0.53
DFFB-209ENST00000477548 NFATC4Q14934 902 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 OGFOD3Q6PK18 319 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 LANCL3Q6ZV70 420 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 C11orf40Q8WZ69 217 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 POLR1DQ9Y2S0 133 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 B3GALT1Q9Y5Z6 326 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 CDC14CA4D256 554 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 B4DEV8 164 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 B4E171 279 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 POLR2HP52434 150 aaKnown RBP11.76□□□□□ -0.53
DFFB-209ENST00000477548 RUNX3Q13761 415 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 OR8G5Q8NG78 346 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 RTN4IP1Q8WWV3 396 aaPredicted RBP11.76□□□□□ -0.53
DFFB-209ENST00000477548 CLUHP3Q96NS8 147 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 OR8D2Q9GZM6 311 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 NAA60Q9H7X0 242 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 GPR84Q9NQS5 396 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 PNO1Q9NRX1 252 aaKnown RBP11.76□□□□□ -0.53
DFFB-209ENST00000477548 DKKL1Q9UK85 242 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 SLC7A11Q9UPY5 501 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 CLDN16Q9Y5I7 305 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 COL4A2P08572 1712 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 FAM24AA6NFZ4 105 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 SERPINE3A8MV23 424 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 J3QW42 95 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 HSPA12AO43301 675 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 DFFBO76075 338 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 CLPSP04118 112 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 TMEM225BP0DP42 221 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 FOSL2P15408 326 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 IL12BP29460 328 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 TMEM187Q14656 261 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 ZNF506Q5JVG8 444 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 TBL1XR1Q9BZK7 514 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 ACTR3CQ9C0K3 210 aaPredicted RBP11.76□□□□□ -0.53
DFFB-209ENST00000477548 MED29Q9NX70 200 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 TCFL5Q9UL49 500 aa11.76□□□□□ -0.53
DFFB-209ENST00000477548 SOX15O60248 233 aa11.75□□□□□ -0.53
DFFB-209ENST00000477548 ZNF205O95201 554 aa11.75□□□□□ -0.53
DFFB-209ENST00000477548 ZNF25P17030 456 aaPredicted RBP11.75□□□□□ -0.53
DFFB-209ENST00000477548 AKT2P31751 481 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms