RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 PPIAL4EA0A075B759 164 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 IGHV3OR15-7A0A075B7D8 119 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 A0A1W2PP11 408 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 OOEPA6NGQ2 149 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 PPIAL4DF5H284 164 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 LGALS8O00214 317 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 CRTAPO75718 401 aaPredicted RBP13.58□□□□□ -0.24
VHL-203ENST00000477538 PPIAL4FP0DN26 164 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 VSIG8P0DPA2 414 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 CALCBP10092 127 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 PRKACAP17612 351 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 SOX6P35712 828 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 BMXP51813 675 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 FGF12P61328 243 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 BTG1P62324 171 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 C2orf76Q3KRA6 126 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 SFRP4Q6FHJ7 346 aaPredicted RBP13.58□□□□□ -0.24
VHL-203ENST00000477538 OR10K2Q6IF99 312 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 OR2W3Q7Z3T1 314 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 LGALS14Q8TCE9 139 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 FAM168AQ92567 244 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 FAM46BQ96A09 425 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 SEH1LQ96EE3 360 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 DCUN1D5Q9BTE7 237 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 CST11Q9H112 138 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 HMG20AQ9NP66 347 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 NLKQ9UBE8 527 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 PPIAL4AQ9Y536 164 aa13.58□□□□□ -0.24
VHL-203ENST00000477538 TRAV38-1A0A0B4J264 116 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 TMEM272A0A1B0GTI8 110 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 TMEM14DPA8MWL7 114 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 MPIG6BO95866 241 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 PAHP00439 452 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 GTF2F2P13984 249 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 SNRPBP14678 240 aaKnown RBP13.57□□□□□ -0.24
VHL-203ENST00000477538 MUC1P15941 1255 aaPredicted RBP13.57□□□□□ -0.24
VHL-203ENST00000477538 ZNF182P17025 639 aaPredicted RBP13.57□□□□□ -0.24
VHL-203ENST00000477538 GIFP27352 417 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 GPR6P46095 362 aaPredicted RBP13.57□□□□□ -0.24
VHL-203ENST00000477538 SNU13P55769 128 aaKnown RBP13.57□□□□□ -0.24
VHL-203ENST00000477538 QRFPP83859 136 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 UNC119Q13432 240 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 ZMYND11Q15326 602 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 MICBQ29980 383 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 AVPI1Q5T686 147 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 TEX36Q5VZQ5 186 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 FIP1L1Q6UN15 594 aaKnown RBP13.57□□□□□ -0.24
VHL-203ENST00000477538 FAM90A1Q86YD7 464 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 OSR2Q8N2R0 312 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 TMEM104Q8NE00 496 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 Q8NFD4 153 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 KCNG3Q8TAE7 436 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 C10orf105Q8TEF2 133 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 RAB1CQ92928 201 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 KCTD12Q96CX2 325 aaKnown RBP13.57□□□□□ -0.24
VHL-203ENST00000477538 PIMREGQ9BSJ6 248 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 MRI1Q9BV20 369 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 BANF2Q9H503 90 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 ABRACLQ9P1F3 81 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 IL36RNQ9UBH0 155 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 OR5V1Q9UGF6 321 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 WIPI2Q9Y4P8 454 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 KIAA2026Q5HYC2 2103 aa13.57□□□□□ -0.24
VHL-203ENST00000477538 CCDC168Q8NDH2 2452 aa13.56□□□□□ -0.24
VHL-203ENST00000477538 ISPDA4D126 451 aa13.56□□□□□ -0.24
VHL-203ENST00000477538 NDUFS8O00217 210 aa13.56□□□□□ -0.24
VHL-203ENST00000477538 LDLRAD4O15165 306 aa13.56□□□□□ -0.24
VHL-203ENST00000477538 KNG1P01042 644 aa13.56□□□□□ -0.24
VHL-203ENST00000477538 IGHV2-70P01814 119 aa13.56□□□□□ -0.24
VHL-203ENST00000477538 MGMTP16455 207 aa13.56□□□□□ -0.24
VHL-203ENST00000477538 MDH2P40926 338 aaKnown RBP13.56□□□□□ -0.24
VHL-203ENST00000477538 SCAND1P57086 179 aa13.56□□□□□ -0.24
VHL-203ENST00000477538 DSCR9P59020 149 aa13.56□□□□□ -0.24
VHL-203ENST00000477538 CLEC12BQ2HXU8 276 aa13.56□□□□□ -0.24
VHL-203ENST00000477538 DEFB108BQ8NET1 73 aa13.56□□□□□ -0.24
VHL-203ENST00000477538 AP3S1Q92572 193 aa13.56□□□□□ -0.24
VHL-203ENST00000477538 MRPS24Q96EL2 167 aaKnown RBP13.56□□□□□ -0.24
VHL-203ENST00000477538 TMEM59Q9BXS4 323 aa13.56□□□□□ -0.24
VHL-203ENST00000477538 FBLN5Q9UBX5 448 aa13.56□□□□□ -0.24
VHL-203ENST00000477538 OR2AT4A6NND4 320 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 FSTL3O95633 263 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 RBM11P57052 281 aaKnown RBP13.55□□□□□ -0.24
VHL-203ENST00000477538 PLA2G7Q13093 441 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 PIGYQ3MUY2 71 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 ZNF404Q494X3 552 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 NHLRC3Q5JS37 347 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 SPIN3Q5JUX0 258 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 Q5PR19 223 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 DNM1P46Q6ZS02 220 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 MUC20Q8N307 709 aaPredicted RBP13.55□□□□□ -0.24
VHL-203ENST00000477538 OR5T2Q8NGG2 359 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 OR51T1Q8NGJ9 327 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 OR5H6Q8NGV6 325 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 ACOT12Q8WYK0 555 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 SELENOIQ9C0D9 397 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 BPESC1Q9GZL8 116 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 TMEM165Q9HC07 324 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 OR14J1Q9UGF5 321 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 RAB22AQ9UL26 194 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 SPATA2Q9UM82 520 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms