RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 KIR2DS1A0A191URI9 304 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 HMSDA8MTL9 139 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 CRHP06850 196 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 IAPPP10997 89 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 KIR2DS4P43632 304 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 KIR2DS1Q14954 304 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 HAGHQ16775 308 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 ZFP62Q8NB50 900 aaPredicted RBP9.67□□□□□ -0.86
COL27A1-204ENST00000477421 RFESDQ8TAC1 157 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 ZNF524Q96C55 264 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 A0A0U1RQK1 487 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 RPS10-NUDT3A0A1W2PQS6 291 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 ZFP92A6NM28 416 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 IGHV3-13P01766 116 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 IGHV3-7P01780 117 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 RPS10P46783 165 aaKnown RBP9.66□□□□□ -0.86
COL27A1-204ENST00000477421 GABRA4P48169 554 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 GSK3AP49840 483 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 ZP4Q12836 540 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 PDZK1IP1Q13113 114 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 PRDX4Q13162 271 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 SNAI3Q3KNW1 292 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 ZNF260Q3ZCT1 412 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 GGNBP1Q5YKI7 109 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 SSX9Q7RTT3 188 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 C1QL2Q7Z5L3 287 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 SLC25A42Q86VD7 318 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 TMEM9BQ9NQ34 198 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 GP1BAP07359 652 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 IFI6P09912 130 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 ELLP55199 621 aaPredicted RBP9.66□□□□□ -0.86
COL27A1-204ENST00000477421 DEFB109BQ30KR1 87 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 TEX30Q5JUR7 227 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 SPANXN5Q5MJ07 72 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 HES3Q5TGS1 186 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 BPIFCQ8NFQ6 507 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 ANGPTL6Q8NI99 470 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 RPS4Y2Q8TD47 263 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 FGF11Q92914 225 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 ANXA10Q9UJ72 324 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 PILRBQ9UKJ0 227 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 PLXNA4Q9HCM2 1894 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 GBF1Q92538 1859 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 TRGV5A0A0B4J1U4 118 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 JTBO76095 146 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 RFPL3SP0C7P2 107 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 MEOX1P50221 254 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 ZXDAP98168 799 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 TESK1Q15569 626 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 OR8G1Q15617 311 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 FNDC7Q5VTL7 733 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 HAS2Q92819 552 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 WNT2BQ93097 391 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 PRRX2Q99811 253 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 SPACA1Q9HBV2 294 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 AK3Q9UIJ7 227 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 GPR160Q9UJ42 338 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 THADAQ6YHU6 1953 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 A0A0C4DFX4 3053 aa9.66□□□□□ -0.86
COL27A1-204ENST00000477421 HPNP05981 417 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 C17orf78Q8N4C9 275 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 OR10Z1Q8NGY1 313 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 C14orf79Q96F83 325 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 ZNF488Q96MN9 340 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 PURGQ9UJV8 347 aaKnown RBP9.65□□□□□ -0.86
COL27A1-204ENST00000477421 IGHV1-45A0A0A0MS14 117 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 GPR31O00270 319 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 TXNL1O43396 289 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 NMBP08949 121 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 PTAFRP25105 342 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 MLF1P58340 268 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 PCOLCEQ15113 449 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 MPPED2Q15777 294 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 LCN15Q6UWW0 184 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 OR1J1Q8NGS3 322 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 MRPL24Q96A35 216 aaKnown RBP9.65□□□□□ -0.86
COL27A1-204ENST00000477421 APOBEC3DQ96AK3 386 aaPredicted RBP9.65□□□□□ -0.86
COL27A1-204ENST00000477421 MUCL1Q96DR8 90 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 RBMXL1Q96E39 390 aaKnown RBP9.65□□□□□ -0.86
COL27A1-204ENST00000477421 BIN3Q9NQY0 253 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 SLC7A10Q9NS82 523 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 ERRFI1Q9UJM3 462 aaPredicted RBP9.65□□□□□ -0.86
COL27A1-204ENST00000477421 CLDN16Q9Y5I7 305 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 PDCD6O75340 191 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 HIKESHIQ53FT3 197 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 SLC38A6Q8IZM9 456 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 DEFB124Q8NES8 71 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 DMBX1Q8NFW5 382 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 M1APQ8TC57 530 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 MITD1Q8WV92 249 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 ZNF285Q96NJ3 590 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 PLK3Q9H4B4 646 aa9.65□□□□□ -0.86
COL27A1-204ENST00000477421 NFYBP25208 207 aa9.65□□□□□ -0.87
COL27A1-204ENST00000477421 PSG4Q00888 419 aa9.65□□□□□ -0.87
COL27A1-204ENST00000477421 ZNF92Q03936 586 aa9.65□□□□□ -0.87
COL27A1-204ENST00000477421 UNC119Q13432 240 aa9.65□□□□□ -0.87
COL27A1-204ENST00000477421 UBE2V2Q15819 145 aa9.65□□□□□ -0.87
COL27A1-204ENST00000477421 STPG1Q5TH74 334 aa9.65□□□□□ -0.87
COL27A1-204ENST00000477421 ZNF573Q86YE8 665 aa9.65□□□□□ -0.87
COL27A1-204ENST00000477421 TMEM123Q8N131 208 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms