RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 KLHL30-AS1Q8NEE0 82 aa13.01□□□□□ -0.33
APOBEC3F-203ENST00000476513 Q8NFD4 153 aa13.01□□□□□ -0.33
APOBEC3F-203ENST00000476513 SNX22Q96L94 193 aa13.01□□□□□ -0.33
APOBEC3F-203ENST00000476513 DUX3Q96PT4 197 aa13.01□□□□□ -0.33
APOBEC3F-203ENST00000476513 PBOV1Q9GZY1 135 aa13.01□□□□□ -0.33
APOBEC3F-203ENST00000476513 GPR173Q9NS66 373 aa13.01□□□□□ -0.33
APOBEC3F-203ENST00000476513 ZFP57Q9NU63 452 aa13.01□□□□□ -0.33
APOBEC3F-203ENST00000476513 TMEM269A0A1B0GVZ9 245 aa13□□□□□ -0.33
APOBEC3F-203ENST00000476513 M0QZK8 103 aa13□□□□□ -0.33
APOBEC3F-203ENST00000476513 PSMD9O00233 223 aa13□□□□□ -0.33
APOBEC3F-203ENST00000476513 SNRNP70P08621 437 aaKnown RBP13□□□□□ -0.33
APOBEC3F-203ENST00000476513 ALOX5APP20292 161 aa13□□□□□ -0.33
APOBEC3F-203ENST00000476513 CHATP28329 748 aa13□□□□□ -0.33
APOBEC3F-203ENST00000476513 OR3A4PP47883 348 aa13□□□□□ -0.33
APOBEC3F-203ENST00000476513 BDH1Q02338 343 aa13□□□□□ -0.33
APOBEC3F-203ENST00000476513 PPP1R8Q12972 351 aaKnown RBP13□□□□□ -0.33
APOBEC3F-203ENST00000476513 SNAPC1Q16533 368 aa13□□□□□ -0.33
APOBEC3F-203ENST00000476513 CLVS2Q5SYC1 327 aa13□□□□□ -0.33
APOBEC3F-203ENST00000476513 TMEM42Q69YG0 159 aa13□□□□□ -0.33
APOBEC3F-203ENST00000476513 ABHD12Q8N2K0 398 aa13□□□□□ -0.33
APOBEC3F-203ENST00000476513 NSMCE2Q96MF7 247 aa13□□□□□ -0.33
APOBEC3F-203ENST00000476513 NOL4LQ96MY1 436 aaPredicted RBP13□□□□□ -0.33
APOBEC3F-203ENST00000476513 DGCR6LQ9BY27 220 aa13□□□□□ -0.33
APOBEC3F-203ENST00000476513 PAPOLBQ9NRJ5 636 aaKnown RBP13□□□□□ -0.33
APOBEC3F-203ENST00000476513 F8VVB4 439 aa12.99□□□□□ -0.33
APOBEC3F-203ENST00000476513 F8VWA3 439 aa12.99□□□□□ -0.33
APOBEC3F-203ENST00000476513 ARPC2O15144 300 aa12.99□□□□□ -0.33
APOBEC3F-203ENST00000476513 CCDC22O60826 627 aa12.99□□□□□ -0.33
APOBEC3F-203ENST00000476513 DHRS3O75911 302 aa12.99□□□□□ -0.33
APOBEC3F-203ENST00000476513 LYL1P12980 280 aa12.99□□□□□ -0.33
APOBEC3F-203ENST00000476513 ARHGDIBP52566 201 aa12.99□□□□□ -0.33
APOBEC3F-203ENST00000476513 HCCSP53701 268 aa12.99□□□□□ -0.33
APOBEC3F-203ENST00000476513 GP2P55259 537 aaKnown RBP12.99□□□□□ -0.33
APOBEC3F-203ENST00000476513 RAB25P57735 213 aa12.99□□□□□ -0.33
APOBEC3F-203ENST00000476513 IL24Q13007 206 aa12.99□□□□□ -0.33
APOBEC3F-203ENST00000476513 ZNF695Q8IW36 515 aa12.99□□□□□ -0.33
APOBEC3F-203ENST00000476513 CHPT1Q8WUD6 406 aa12.99□□□□□ -0.33
APOBEC3F-203ENST00000476513 RAX2Q96IS3 184 aa12.99□□□□□ -0.33
APOBEC3F-203ENST00000476513 DNAJB9Q9UBS3 223 aa12.99□□□□□ -0.33
APOBEC3F-203ENST00000476513 DSCAML1Q8TD84 2053 aa12.99□□□□□ -0.33
APOBEC3F-203ENST00000476513 LEUTXA8MZ59 168 aa12.98□□□□□ -0.33
APOBEC3F-203ENST00000476513 CCL24O00175 119 aa12.98□□□□□ -0.33
APOBEC3F-203ENST00000476513 DLGAP1O14490 977 aa12.98□□□□□ -0.33
APOBEC3F-203ENST00000476513 IGLV1-47P01700 117 aa12.98□□□□□ -0.33
APOBEC3F-203ENST00000476513 IGHA1P01876 353 aa12.98□□□□□ -0.33
APOBEC3F-203ENST00000476513 HSD17B1P14061 328 aa12.98□□□□□ -0.33
APOBEC3F-203ENST00000476513 ECI1P42126 302 aa12.98□□□□□ -0.33
APOBEC3F-203ENST00000476513 PRAMEF5Q5TYX0 476 aa12.98□□□□□ -0.33
APOBEC3F-203ENST00000476513 RTN4RL2Q86UN3 420 aa12.98□□□□□ -0.33
APOBEC3F-203ENST00000476513 OR52N4Q8NGI2 321 aa12.98□□□□□ -0.33
APOBEC3F-203ENST00000476513 TEX47Q8TBZ9 253 aa12.98□□□□□ -0.33
APOBEC3F-203ENST00000476513 PKIBQ9C010 78 aa12.98□□□□□ -0.33
APOBEC3F-203ENST00000476513 MYLK2Q9H1R3 596 aa12.98□□□□□ -0.33
APOBEC3F-203ENST00000476513 NUFIP1Q9UHK0 495 aaKnown RBP12.98□□□□□ -0.33
APOBEC3F-203ENST00000476513 LAMP5Q9UJQ1 280 aa12.98□□□□□ -0.33
APOBEC3F-203ENST00000476513 MOB4Q9Y3A3 225 aa12.98□□□□□ -0.33
APOBEC3F-203ENST00000476513 HSPE1-MOB4S4R3N1 261 aa12.98□□□□□ -0.33
APOBEC3F-203ENST00000476513 PRR23D1E9PI22 279 aaPredicted RBP12.97□□□□□ -0.33
APOBEC3F-203ENST00000476513 TTRP02766 147 aa12.97□□□□□ -0.33
APOBEC3F-203ENST00000476513 PRR23D2P0DMB1 279 aaPredicted RBP12.97□□□□□ -0.33
APOBEC3F-203ENST00000476513 ESRRGP62508 458 aa12.97□□□□□ -0.33
APOBEC3F-203ENST00000476513 CBX1P83916 185 aa12.97□□□□□ -0.33
APOBEC3F-203ENST00000476513 GRK1Q15835 563 aa12.97□□□□□ -0.33
APOBEC3F-203ENST00000476513 MICAQ29983 383 aa12.97□□□□□ -0.33
APOBEC3F-203ENST00000476513 TPTE2P1Q5T6R2 138 aa12.97□□□□□ -0.33
APOBEC3F-203ENST00000476513 C9orf66Q5T8R8 295 aa12.97□□□□□ -0.33
APOBEC3F-203ENST00000476513 DEGS2Q6QHC5 323 aa12.97□□□□□ -0.33
APOBEC3F-203ENST00000476513 ZNF596Q8TC21 504 aa12.97□□□□□ -0.33
APOBEC3F-203ENST00000476513 CEP19Q96LK0 163 aa12.97□□□□□ -0.33
APOBEC3F-203ENST00000476513 RCHY1Q96PM5 261 aa12.97□□□□□ -0.33
APOBEC3F-203ENST00000476513 CHST6Q9GZX3 395 aa12.97□□□□□ -0.33
APOBEC3F-203ENST00000476513 MTCH1Q9NZJ7 389 aa12.97□□□□□ -0.33
APOBEC3F-203ENST00000476513 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.97□□□□□ -0.33
APOBEC3F-203ENST00000476513 DNAH7Q8WXX0 4024 aa12.97□□□□□ -0.33
APOBEC3F-203ENST00000476513 ARRDC5A6NEK1 342 aa12.96□□□□□ -0.33
APOBEC3F-203ENST00000476513 A6NIN4 97 aa12.96□□□□□ -0.33
APOBEC3F-203ENST00000476513 PRR32B1ATL7 298 aa12.96□□□□□ -0.33
APOBEC3F-203ENST00000476513 PEX2P28328 305 aa12.96□□□□□ -0.33
APOBEC3F-203ENST00000476513 MFGE8Q08431 387 aaPredicted RBP12.96□□□□□ -0.33
APOBEC3F-203ENST00000476513 TRAPPC6BQ86SZ2 158 aa12.96□□□□□ -0.33
APOBEC3F-203ENST00000476513 TRMT10AQ8TBZ6 339 aaKnown RBP12.96□□□□□ -0.33
APOBEC3F-203ENST00000476513 SLAMF9Q96A28 289 aa12.96□□□□□ -0.33
APOBEC3F-203ENST00000476513 CMTM5Q96DZ9 223 aa12.96□□□□□ -0.33
APOBEC3F-203ENST00000476513 CDRT15Q96T59 188 aa12.96□□□□□ -0.33
APOBEC3F-203ENST00000476513 NIPSNAP1Q9BPW8 284 aa12.96□□□□□ -0.33
APOBEC3F-203ENST00000476513 MROQ9BYG7 248 aa12.96□□□□□ -0.33
APOBEC3F-203ENST00000476513 PALMDQ9NP74 551 aa12.96□□□□□ -0.33
APOBEC3F-203ENST00000476513 SCOCQ9UIL1 159 aa12.96□□□□□ -0.33
APOBEC3F-203ENST00000476513 LINC00527Q9UJ94 153 aa12.96□□□□□ -0.33
APOBEC3F-203ENST00000476513 V9GYS6 101 aa12.96□□□□□ -0.33
APOBEC3F-203ENST00000476513 FAM172BPA6NC97 362 aa12.95□□□□□ -0.34
APOBEC3F-203ENST00000476513 SERPINE3A8MV23 424 aa12.95□□□□□ -0.34
APOBEC3F-203ENST00000476513 H3BN98 237 aa12.95□□□□□ -0.34
APOBEC3F-203ENST00000476513 LY6LH3BQJ8 138 aa12.95□□□□□ -0.34
APOBEC3F-203ENST00000476513 BUB1B-PAK6H3BSN5 160 aa12.95□□□□□ -0.34
APOBEC3F-203ENST00000476513 PRODHO43272 600 aa12.95□□□□□ -0.34
APOBEC3F-203ENST00000476513 PSPNO60542 156 aa12.95□□□□□ -0.34
APOBEC3F-203ENST00000476513 INMTO95050 263 aa12.95□□□□□ -0.34
APOBEC3F-203ENST00000476513 HAND1O96004 215 aa12.95□□□□□ -0.34
APOBEC3F-203ENST00000476513 FAM106CPP0CH98 169 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms